KEGG   Spiroplasma sabaudiense: SSABA_v1c05290
Entry
SSABA_v1c05290    CDS       T03048                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ssab  Spiroplasma sabaudiense
Pathway
ssab03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ssab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SSABA_v1c05290 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssab03400]
    SSABA_v1c05290 (recD)
Enzymes [BR:ssab01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     SSABA_v1c05290 (recD)
DNA repair and recombination proteins [BR:ssab03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SSABA_v1c05290 (recD)
SSDB
Motif
Pfam: AAA_30 AAA_19 UvrD_C_2 Viral_helicase1 AAA_11 SH3_13 OB_YrrC HHH_RecD2 SLFN-g3_helicase UvrD_C AAA_22 PIF1 AAA_12 nSTAND3 UvrD-helicase NPHP3_N AAA_16 T2SSE AAA_28 AAA_5 HHH_5 Mg_chelatase
Other DBs
NCBI-ProteinID: AHI53936
UniProt: W6AAA0
LinkDB
Position
complement(599763..601967)
AA seq 734 aa
MSTKKYRGFLSKFLFINESGWGIGLFIDEDNKNHQMRIKGPIGQMQTKIIYEIQGNLEDH
PKYGQALEVSSFKIADSTTIKQAIGFLSSDLFPTIGKKTAEQIVDFLGVDAIKKIRQDPE
IIKTVPDISHSAIEIITSVVNRVDQEQELVEIFTMNGLRLPFLNQMLKWHDDKNELLEIF
KTDFYSYSRKNSFQPFLEVDRVSLYFGVEKYGVVRISAWIYEIIKEILFTTGHTFTTSEV
LIAETRKRLQVSRETVIEALVFCKNQKTLVFDNHKIYSDESWSDEEEIITTIKTITSRAN
LKPTLENFSEDDLIQEIEQEIETSFKIPNFQYDDFQRAALKSFLSSNILILTGGPGTGKT
MVINGMVRLYQKIYGSQNFALGAPTGRAASRITETTNFKATTIHKLLKASGDDVFEINAS
NPLDLDLIILDEASMLSNHLFADFLRGTSPVKKLVLVGDVEQLPSVSYGNLFEDLITANK
FPTIKLTKIFRQKERNGIIELATAISQGQPQNLEFENLKNIHFLFEENNQINSENLIKTY
QALVAKQPVGNLNYLQVICPYYKGELGINNLNTIIQKKFNGNLLKGDKIFKKGEMKFAIN
DKVMYLKNDSTLELSNGDMGIINLLKFENKKFTSALVEFNNRDIVLKNSNFSELTLSYAI
SVHKSQGSEYNNVILILDPSSNNYFLTKKIIYTAITRAKENLYIIGSQESFWKGLEKITA
SRKTTLVEKIQKNF
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgagtactaaaaaatatcgcgggtttttatcaaaatttttatttattaatgaaagtggc
tgaggaattggtctgttcattgatgaggataataaaaatcatcaaatgcgaattaaagga
ccgattggtcaaatgcaaacaaaaatcatttatgaaattcaaggaaatttagaagaccat
ccaaaatacggccaagctcttgaggttagttcttttaaaatcgctgactcaacaacaatt
aaacaagcaattgggttcttgtcatctgatttattcccaacaattggtaaaaaaaccgca
gagcaaattgttgattttttaggggttgatgccataaaaaaaattcgtcaagaccctgaa
atcattaaaactgtcccagatatttcacacagtgcaattgaaataattacaagtgtggtt
aatcgagtggatcaggagcaagaactagttgagattttcacaatgaacggtttgcgactg
ccatttttaaatcaaatgctaaagtgacatgatgataaaaatgagctcctagaaattttc
aaaacagatttttatagttactcgcgaaaaaatagctttcaaccatttttggaagttgat
cgggtttccctttattttggggttgagaaatacggggtcgttcgaatttcagcttgaatt
tatgaaattattaaagagattttatttacaactggacatacttttactacttctgaggtt
ttgattgctgaaacaagaaagcgcttgcaagtttctcgagagactgttattgaagctttg
gtgttttgtaaaaatcaaaaaactttagtttttgataatcacaaaatttactcagatgaa
agttgaagtgatgaggaagaaattattactacaatcaaaacaattacatcgcgagctaat
ttaaaaccaacacttgaaaattttagtgaagatgatttaatacaagaaatcgaacaagaa
atcgaaactagttttaaaattccaaattttcaatatgatgattttcaaagagcagcattg
aaatcatttttaagttctaatattttaattttaactgggggaccaggaactggtaaaact
atggtaattaatgggatggtgcggttataccaaaaaatttatggatctcaaaattttgct
cttggggcaccgacgggtcgagcagcaagtcgtatcacagaaacaactaattttaaggca
acaacaattcataaactattgaaagctagtggagatgatgtttttgaaattaatgccagc
aatcctttagatttagatttaataattttagatgaagccagtatgctaagtaatcattta
tttgcagattttttacgagggacaagccctgttaaaaaactagttttagttggtgacgtg
gaacaacttcccagtgttagttatgggaatttatttgaggatttaattactgctaataaa
tttccaacaattaaattaacaaaaatttttcgtcaaaaagaacgcaacggaattattgaa
ttagcaactgccatttctcaaggacaaccccaaaatcttgaatttgaaaatttgaaaaac
attcattttttatttgaagaaaataatcaaatcaattcagaaaatttaattaaaacttat
caagctcttgtggcaaaacaacctgttggtaatttaaactacttgcaagtgatttgtcca
tattataaaggggagttggggattaataatttaaacacgataattcaaaaaaaatttaat
ggaaatttactaaaaggtgataaaatttttaaaaagggagaaatgaaatttgcaataaac
gataaagtgatgtatttaaaaaatgactcaactcttgaactttcaaatggtgatatggga
ataatcaacctcttaaaatttgaaaataaaaaattcactagtgcccttgtagaatttaat
aatcgtgatattgtcttgaaaaacagcaatttctcagaattgactttgagttatgcaatt
agtgttcacaaaagccagggaagtgaatataacaatgtgattttaatcttagaccctagt
tctaataattattttttaacaaaaaaaattatttatacagcaattacaagagctaaagag
aatctctacattataggtagccaagagtcattttgaaaaggtttggagaaaataaccgct
tcgagaaaaacaactcttgtagaaaaaatccaaaagaatttttag

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