Spiroplasma sabaudiense: SSABA_v1c05650
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Entry
SSABA_v1c05650 CDS
T03048
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssab
Spiroplasma sabaudiense
Brite
KEGG Orthology (KO) [BR:
ssab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssab03016
]
SSABA_v1c05650 (truB)
Enzymes [BR:
ssab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SSABA_v1c05650 (truB)
Transfer RNA biogenesis [BR:
ssab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SSABA_v1c05650 (truB)
Prokaryotic type
SSABA_v1c05650 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHI53969
UniProt:
W6AJR3
LinkDB
All DBs
Position
complement(644655..645575)
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AA seq
306 aa
AA seq
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MLQESGVFLVDKPSGMTSNDLIKKIQKKLNIKKIGHAGTLDPLASGLMVVLVNQGTKISD
FLLAENKSYIVKLQLFLDTDSKDITGAEIKREEPFKIDKKALKDIVDKYNGYIYDQYPPI
YSAIKVQGKKLYEYARNKQEDLVKIEPRKVTIKECELIKYDKKEHTISLKLQVSKGTYIR
SFVCDFAKDLGTIATVKELTRTASGNFKLTQAKQMDEIKWEHLLPMYETLIRSNQVLMQY
HFEQDVRQGKQITLSHISSPIVFIVNDEKKVIGIYKHVANHLYACQRGLWEDDPNIKKTE
AEMEGY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgttacaagaatctggagtttttttagtggataagccttcaggcatgacatccaatgat
ttgataaagaaaattcaaaaaaaactaaatattaaaaaaattggccatgcaggaactctt
gatcctttggcttctggactaatggttgttttggttaatcaaggaactaaaattagtgat
tttttattggcagaaaacaaatcatatattgtgaaattgcaattatttttagataccgat
tcaaaagatatcaccggagctgaaattaagcgtgaagaaccctttaaaattgataaaaaa
gccttaaaagatattgttgataaatataatggttatatttatgatcaatacccacctata
tattcagcaataaaggttcaaggcaaaaagctttatgaatacgctcgaaacaagcaagag
gatttagttaaaatcgaacctcgcaaagtaacaattaaagagtgtgagttgataaagtat
gataaaaaagaacatacaatttcattgaagttacaagttagcaaaggtacttacattaga
agttttgtttgcgattttgccaaagacttggggacaatcgcaactgtcaaggaattaaca
agaacggcctcgggaaactttaagttaacccaagcaaaacaaatggatgaaattaaatga
gagcacttgttgccaatgtatgaaaccttaataagaagcaatcaagttctaatgcagtat
cattttgagcaagatgtaagacagggaaagcaaatcacactatctcatatatcttcaccg
attgtatttattgtcaatgatgaaaaaaaagtcattggaatttataagcatgtagcaaat
catttgtatgcttgtcaacggggcttatgagaagatgatccaaatattaaaaaaactgaa
gctgagatggagggctattaa
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