Spiroplasma sabaudiense: SSABA_v1c07250
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Entry
SSABA_v1c07250 CDS
T03048
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ssab
Spiroplasma sabaudiense
Brite
KEGG Orthology (KO) [BR:
ssab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssab03016
]
SSABA_v1c07250 (truA)
Enzymes [BR:
ssab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SSABA_v1c07250 (truA)
Transfer RNA biogenesis [BR:
ssab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SSABA_v1c07250 (truA)
Prokaryotic type
SSABA_v1c07250 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AHI54127
UniProt:
W6AAP2
LinkDB
All DBs
Position
complement(836861..837637)
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AA seq
258 aa
AA seq
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MVSFIKTQVDGKNYFVLQVSYNGTNYSGWVIQKNALTIQGCLNRAIKIVTKTNKFRTIGA
SKTDAGVHALDQRVWLELEFMPNLQGFVKGINKALPDDIQVMGIKQVKSDFYIRNTKSKL
YKYQINNGFYNIEKENFMVFYDRCKLNLAKIKSLAKIFVGEHDFFLFSGLSQEESLKIST
KRRIDKIFVKRNKQNQIIIFFQAKGFIRYQIRVIIQTILALYEGKITISRVKDALSGDGS
KIPYKANPKGLTLVKITY
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggtatcctttataaaaacccaagtcgatggtaagaattatttcgttctccaagtttct
tataatggtacaaattactcgggttgagtaattcaaaaaaatgcattaacaattcaaggc
tgtctgaatcgagcaattaaaattgttacaaaaaccaataaatttcgcacaattggtgcc
agtaaaactgatgcgggagtccacgctctcgaccaaagggtctgattagaactggaattt
atgccaaatttacaaggttttgtaaaaggaattaacaaggcactacccgacgatattcaa
gttatgggaataaaacaagtaaaaagtgatttttatattcgtaacacaaagtcaaaatta
tataaatatcaaataaataatggattttataacattgagaaagaaaattttatggttttt
tatgaccgctgcaaactaaatttagccaaaattaaaagcttggctaaaatttttgttggt
gaacatgattttttcctgttttctgggctatcacaagaagaaagtttaaaaatctcaaca
aagagaagaatagataaaatatttgtaaaacgaaataaacaaaatcaaataataatattt
tttcaagctaaaggatttatcagatatcagataagagtaattattcaaactattttggct
ctttatgagggaaaaatcacaatttcaagagttaaagatgctctaagtggtgatgggagc
aaaatcccctataaagcaaaccccaaaggcttaaccttagtaaaaataacatattaa
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