Spiroplasma sabaudiense: SSABA_v1c07310
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Entry
SSABA_v1c07310 CDS
T03048
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssab
Spiroplasma sabaudiense
Pathway
ssab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SSABA_v1c07310 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssab03021
]
SSABA_v1c07310 (rpoA)
03400 DNA repair and recombination proteins [BR:
ssab03400
]
SSABA_v1c07310 (rpoA)
Enzymes [BR:
ssab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SSABA_v1c07310 (rpoA)
Transcription machinery [BR:
ssab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SSABA_v1c07310 (rpoA)
DNA repair and recombination proteins [BR:
ssab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SSABA_v1c07310 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AF1548-like_C
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AHI54133
UniProt:
W6AAB6
LinkDB
All DBs
Position
complement(841880..842833)
Genome browser
AA seq
317 aa
AA seq
DB search
MKQFTKPEFTLLKEEKAKAYGKFMVEPLERGFGITLGNSLRRTLLSATPGASVYAIKLEG
ASHEFTSIKGIVENVSRIILNIKNLVLTINTNIFEDEEVAELKIVSSTEGPVLAKDIICP
AGVEVLNKDLHIATIAENGSINMTLFAKNSRGYRSFKENKKEKLVADAITIDSNYSPIVN
VNYAVDVTKIGRSIDLEKLEIEVETNGSISASDAIAIASKVMVEHLELFVNLNSEISTLE
VIGQSDDDDEKELDKMIEDLDFTQRSLNCLKRAQINTLRDLVSRTEDEIQEIRNLGRKSF
KEIKDKVAQLTLNFKQD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatttacaaaaccagaatttactcttttaaaagaagaaaaagcaaaagcttac
ggaaaatttatggttgaaccacttgaaagaggttttggaattactctaggtaattcactt
agaagaacacttctgtcagcaacacctggtgcaagtgtttatgccattaaactcgagggt
gcttcccatgaatttacatcaattaaagggatagttgaaaacgtaagtcgaattatatta
aatattaaaaatttagttttaacaatcaatacaaatatttttgaggacgaagaagttgca
gaattaaaaattgtttcttcaacagaaggaccagttttagcaaaagatattatttgccca
gctggtgtggaagttctgaataaagatttgcatatcgcaacaattgctgaaaatggttca
attaatatgactttatttgctaaaaattctcgtggctatagatcttttaaagaaaataag
aaagaaaaattagtagcagatgcaataacaattgattccaattattctccaatagtaaat
gtaaattatgcagttgatgtaactaaaattggtcgctcaattgacttagaaaaactggag
attgaagtagagacaaacggttcaatatcagcatctgatgcaattgcaattgcttcaaaa
gttatggtagaacatttggaattatttgttaacttaaatagcgaaatatcaactcttgaa
gtaatcggtcaatctgatgatgacgacgaaaaagaactagataagatgattgaagattta
gatttcacacaaagaagtttgaattgcttaaaaagagctcaaataaacacattaagggac
ctagtttctcgtaccgaagatgaaattcaagaaattcgtaatctaggtagaaaatcattt
aaggaaattaaagataaagttgcacaattaactttaaactttaaacaagattag
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