Staphylococcus saccharolyticus: I6I31_01050
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Entry
I6I31_01050 CDS
T07353
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssac
Staphylococcus saccharolyticus
Pathway
ssac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6I31_01050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssac03021
]
I6I31_01050
03400 DNA repair and recombination proteins [BR:
ssac03400
]
I6I31_01050
Enzymes [BR:
ssac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I6I31_01050
Transcription machinery [BR:
ssac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6I31_01050
DNA repair and recombination proteins [BR:
ssac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6I31_01050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
DUF961
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QQB98678
LinkDB
All DBs
Position
complement(197338..198282)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPRIETIEVSEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEG
VLHEFSAVDNVVEDVSTIIMNIKKIALKIYSEEDKTLEIDVKDEGEVTASDITHDSDVEI
LNPELKIATVSKGGHLKVRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTV
ENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVGLTDEAQNAEIMIEK
EEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVK
YKLEDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgaaaaacctagaattgagacaattgaagttagtgaagatgctaaattc
ggtaaattcgttgttgaaccacttgaacgtggctatggtactacactaggaaactcctta
cgtcgtatcctactatcttcattaccaggtgcagccgttaaatacattgaaattgaagga
gttttacacgaattctcagcagtagataatgttgttgaagatgtttcaactattattatg
aacattaagaaaatcgcattaaaaatttactctgaagaagataaaactctagaaatcgat
gttaaagatgaaggcgaagttactgcaagtgacattactcacgacagtgatgttgagatt
ttaaatccagaacttaaaatcgcaactgtgtctaaaggtggacatcttaaagtgcgtctt
gttgctaataagggtagaggttacgcattagctgaacaaaataatactagtgatttacca
attggtgtaattcctgttgattcactatattcacctgtagaacgtgttaactatacagtt
gaaaatacacgtgtaggtcaaagtagtgattttgataaattaactttagatgtttggaca
aacggttcaatcacaccacaagagtcagtctcattagcagctaaaataatgactgaacac
ttgaatatctttgtaggtctaactgatgaagctcaaaatgctgaaatcatgattgaaaaa
gaagaagatcaaaaagagaaagtacttgaaatgtctattgaagaattagacttatctgta
cgttcttataactgcttaaaacgcgcaggaatcaattctgtacaagagttagctgataaa
tctgaagctgacatgatgaaagtgcgtaatttaggtcgtaaatctttagaagaagtaaaa
tataaattagaagatttaggattaggattaagaaaagaagattga
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