Staphylococcus saccharolyticus: I6I31_04325
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Entry
I6I31_04325 CDS
T07353
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ssac
Staphylococcus saccharolyticus
Brite
KEGG Orthology (KO) [BR:
ssac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssac03032
]
I6I31_04325 (gyrB)
03400 DNA repair and recombination proteins [BR:
ssac03400
]
I6I31_04325 (gyrB)
Enzymes [BR:
ssac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
I6I31_04325 (gyrB)
DNA replication proteins [BR:
ssac03032
]
Prokaryotic type
DNA Topoisomerases
I6I31_04325 (gyrB)
DNA repair and recombination proteins [BR:
ssac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I6I31_04325 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QQB99102
LinkDB
All DBs
Position
complement(904472..906397)
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AA seq
641 aa
AA seq
DB search
MVNTLSDVNNTENYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEAL
AGYANHIEVVIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTILHAGGKFGGGGYKVS
GGLHGVGSSVVNALSQDLEVYVHRNGKIHHQAYKQGVPQFDLKVIGDTDKTGTAIRFKAD
SEIFTETIVYNYETLQKRIRELAFLNKGIQITLKDERDEEVREDSYHYEGGIKSYVDLLN
ENKEPLHEEPIYIHQSKDDIEVEIALQYNSGYATNLLTYANNIHTYEGGTHEDGFKRALT
RVLNSYGIQSKIIKEDKLSGEDTREGLTAIVSIKHGDPQFEGQTKTKLGNSEVRQVVDRL
FSEHFERFLYENPPVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSS
KNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMIT
AFGTGIGGEFDITEARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPP
LYKLTQGKQKYYVFNDRELDKLKQELNPTPKWSISRYKGLGEMNADQLWETTMNPEYRSM
LQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLDF
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatacattgtcagatgtaaacaacacagaaaattatggtgctggacagatacaa
gttttagagggtcttgaagcagtacgtaaaagaccaggtatgtatattggttcaacttcc
gaaagaggtttgcaccacttagtatgggaaattgttgataatagtattgacgaggcatta
gccggttatgctaatcatatagaggtcgtaattgagaaagacaattggataaaagttact
gacaatggccgtggaattcctgttgatattcaagaaaagatgggacgtcctgctgtcgag
gttatcttaactatactccatgccggaggtaaattcggaggtggcggatacaaagtatct
gggggtcttcatggtgttggttcttcggtagttaacgcactttcacaagatcttgaggtt
tatgtacaccgaaatggtaagattcaccatcaagcttacaaacaaggtgtaccgcaattt
gatcttaaagtaatcggagatacagataaaacaggcacagcgatacgttttaaagctgac
tcagaaatctttacagaaacaattgtctataattatgaaaccttacaaaaacgtatacgt
gaacttgctttcttgaataaaggcattcaaattactttaaaagatgaacgtgatgaagaa
gtacgtgaagactcttatcattatgagggcggtattaaatcttatgtagatttattaaat
gagaataaagaacctctacatgaggagcctatctacatacatcaatctaaagatgatatc
gaagttgaaattgcacttcaatacaatagtggctacgcaacaaacttattaacttatgct
aacaatattcatacctacgaaggcgggacacatgaagatggctttaaacgtgctttaaca
cgtgttcttaatagctatggtatccaaagtaagattatcaaagaagataaattatctggt
gaagatacacgtgaaggattaacagcaattgtatctatcaaacatggcgacccacaattc
gaaggacaaactaagactaaattaggtaactctgaggtacgtcaagttgtagatagatta
ttttctgagcattttgaacgtttcttatacgagaatccacccgttggtcgcattattgta
gaaaaagggattatggcatctcgtgcacgtgtggctgctaaaaaggcacgtgaagtaaca
cgtcgtaaatcagcattggatgtttcaagcttaccaggtaaattagctgattgttctagt
aaaaatcctgaagaaagtgagattttcttagtagagggtgactctgccggggggtctaca
aaatcgggtcgtgattcaagaacgcaagcaatattacctttaagagggaaaatcttaaac
gtggaaaaagcacgtcttgatcgtatattaaataacaatgaaattcgtcaaatgattacg
gcgtttggtacaggtattggtggcgaatttgatattactgaagcacgttatcataaaatt
gtaattatgacagatgctgatgtagatggcgcacatattcgtacgttgttactgacattc
ttctatcgttttatgagaccattgattgaagcgggttatgtatacattgctcaaccgcct
ttatacaaacttactcaaggtaaacaaaaatattatgtctttaacgatagagagttagac
aaacttaaacaagaattaaatccgacacctaaatggtcaatctctcgttacaaaggtctt
ggagaaatgaatgcggatcagttatgggagacaacaatgaatcctgaataccgttcaatg
ttacaagtaagacttgaagatgcgattgatgcagatcaaacatttgaaatgttaatgggt
gacgttgtagaaaatcgtagacaatttatcgaggataatgcagtttacgctaacctagat
ttctaa
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