Staphylococcus saccharolyticus: I6I31_08540
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Entry
I6I31_08540 CDS
T07353
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ssac
Staphylococcus saccharolyticus
Pathway
ssac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I31_08540 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssac03019
]
I6I31_08540 (rny)
Messenger RNA biogenesis [BR:
ssac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6I31_08540 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KhpA-B_KH
HDOD
KH_2
GAGA_bind
Glt_symporter
Motif
Other DBs
NCBI-ProteinID:
QQB98078
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All DBs
Position
1768896..1770455
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AA seq
519 aa
AA seq
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MNLLSLLLILLGIILGVVVGYVVARNLLHQKQVQARQTAEDIVNYANKEADNIKKEKLLE
AKEENQILKEQVESELRERRGELQRQETRLLQKEENLDRKSELLDKKDEILEQKESKLEE
RQQQVDAKESSVQTLIMKHEQELERISGLTQEEAVNEQLQRVEEELSQDIAVLVKEKENE
AKEKVDKTAKELLATTVQRLAADHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEDMVEKARKEVGDIIRD
AGEQATFEINVHNMHPDLVKILGRLNYRTSYGQNVLKHSIEVAHLSGMFAAELGEDVTLA
KRSGLLHDVGKAIDHEVEGSHVEIGVELAKKYGENDTVINAIYSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSESYDGVEKAFAIQAGREIRVVVSPDEIDD
LKSYRLARDIKNQIEEELQYPGHIKVTVVRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaagcctcctactcattttgctggggattattctaggcgttgttgtaggg
tatgttgttgcccgaaatttattacaccaaaaacaagttcaagcaagacaaactgccgaa
gatattgtcaattatgcaaataaagaagcagacaatattaagaaagaaaagttattagag
gcaaaagaagaaaaccaaattttaaaagaacaagttgaaagtgaactacgtgagagacgt
ggggaacttcaaagacaagaaacccgacttcttcaaaaagaagagaacttggatcgaaaa
tctgaacttttagataaaaaagatgagattttagaacaaaaagaatcaaaacttgaagaa
agacaacaacaagtagatgcaaaagagagtagtgttcaaacgttaataatgaagcatgaa
caagaattagaacgcatctccggtctcactcaagaagaagctgtaaatgaacagctccaa
agagttgaagaagaactgtcacaagatattgcagtacttgttaaagaaaaagaaaatgaa
gcaaaagaaaaagttgataaaacagctaaagaattacttgctacaacagtacaaagacta
gcagccgatcatacaactgaatctactgtttcagttgttaacttacctaacgatgaaatg
aaaggtcgtataataggtagagaaggtagaaatatacgtacgttagaaacacttactggt
atcgacttaattatcgatgatacgccagaagcagttattttatcaggctttgacccaatt
agacgtgaaattgcaagaacagcattagtaaatttagtttcagatggacgtatccatcct
ggacgcattgaagatatggttgaaaaagctagaaaagaagtaggcgatatcattagagat
gcaggggaacaagcgacatttgaaatcaatgtccataatatgcatcctgatttagttaaa
attcttggacgactaaactatcgtacaagttatggtcaaaatgttttaaaacattccata
gaagttgcacatctttcaggtatgttcgctgcagagttaggtgaagatgttactttagct
aaacgttcaggtttactacatgatgtaggaaaagcaatcgaccatgaagtagaaggtagt
cacgtagaaattggtgttgaattagctaagaaatacggtgaaaatgatacagttattaat
gcaatttactcccatcatggcgatgtagagccaacttcaattatttcaatattggtagca
gccgccgatgctttatctgctgctcgtcctggtgctcgtaaagagacacttgagaactat
atcagaagacttgaaagactcgaaaccttatcagaaagctatgatggagttgaaaaggca
tttgcaattcaagcaggtagagaaattagagtagttgtttcacctgatgaaattgatgat
ttaaaatcatatagattggctagagatattaagaaccaaatagaagaagaattacaatat
cctgggcacatcaaagtgacagttgttcgagagactagagcagtagaatatgctaaataa
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