Sphingomonas sanguinis: KV697_02585
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Entry
KV697_02585 CDS
T09609
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ssag
Sphingomonas sanguinis
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssag03016
]
KV697_02585 (rnd)
Enzymes [BR:
ssag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KV697_02585 (rnd)
Transfer RNA biogenesis [BR:
ssag03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KV697_02585 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QXT36264
LinkDB
All DBs
Position
610536..611714
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AA seq
392 aa
AA seq
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MHVHPLITDSATLANLCARLSQADYVMVDTEFMRESTYWPELCLIQIADTEEAAAIDPKA
PGLDMTPLLDLLVNNDQVLKVFHAGGQDIEIIYNLTGKTPHPLFDTQIAAMALGQGEQIG
YSNLVDSWLGITVDKGARFTDWSRRPLDQRQVDYAIGDVTHLAAIFPKMLERLRKTGRGA
WLDQEMERLADPAHYANDPDVAWKRVRVSGRKPDMLGRLKALARWRELEAQAKDLPRGRI
VKDETLADLAGHPPRKQADLAKVRGLSATWAGNDIGARLMDALDGAEPLSADELPARDDR
KPGLGREGALVADLLKLLLKIRARDIDVAPRLLARADDLEMLAAGVRSGLSVLDGWRFEQ
FGRDALDLVEGRTGFVVKGGKLKMVRTAEDAA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcacgttcatccgttgattaccgacagcgccacgctcgccaatctctgcgcccgtctc
tcgcaggccgactatgtgatggtcgataccgagttcatgcgggaaagcacctattggccc
gagctttgcctgatccagatcgccgataccgaagaggccgccgcgatcgatcccaaggcg
ccggggctggacatgaccccgctgctcgacctgctggtcaacaacgatcaggtgctcaag
gtcttccacgccggtgggcaggatatcgagatcatctataacctgaccggcaagaccccg
catccgctgttcgatacgcagatcgcggcaatggcgctgggccagggcgaacagatcggc
tattccaacctcgtcgacagctggctggggattacggtcgacaagggcgcgcgtttcacc
gactggtcgcgccgtccgctcgatcagcggcaggtcgattatgcgatcggcgatgtcact
catctggccgcgatcttccccaagatgcttgagcggttgcgcaagaccggacgcggcgca
tggctggatcaggagatggagcggctggccgatccggcccactatgccaacgaccccgac
gtggcgtggaagcgggtgcgcgtctcgggccgcaagcccgatatgctcggccggttgaag
gcgctggcccgctggcgcgagttggaggcgcaggccaaggatctgccgcgcggccgtatc
gtcaaggacgagacgctggccgacctcgccgggcatccgccgcgcaaacaggccgatctc
gccaaggtacgcggattgtcggcaacctgggcgggcaacgatatcggcgcgcgcctgatg
gatgcgctcgacggcgccgagccgctgagcgccgacgaactgcccgcgcgcgacgatcgc
aagccgggtctgggtcgcgagggtgcgctggtcgccgacctgctcaagctgctgctgaag
atccgggcccgcgacatcgacgtggcgccgcgcctgttggcgcgggccgacgatctggaa
atgctggcggcgggtgtccgctcgggcctgtcggtgctcgacggctggcgcttcgagcaa
ttcggccgcgatgcgctcgatctggtcgagggacgcaccggtttcgtcgtcaagggcggc
aagctgaagatggtccgcaccgccgaggacgcggcatga
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