Sphingomonas sanguinis: KV697_03835
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Entry
KV697_03835 CDS
T09609
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssag
Sphingomonas sanguinis
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssag03400
]
KV697_03835
Enzymes [BR:
ssag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KV697_03835
DNA repair and recombination proteins [BR:
ssag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KV697_03835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QXT36476
LinkDB
All DBs
Position
complement(885024..887978)
Genome browser
AA seq
984 aa
AA seq
DB search
MGEPRRPRLHTIPAHRGFADALVAGLMRRSGGDPLTLAQGMILLPTNRGVRAVTEAFVRA
SGGGLILPRMVALGDPELGEAAGSALDPADADAPPPPAIAPSARRMILARLVEQERQRAG
QPVTAAEAVRLAGDLARTLDQMLVEEVDPAELAALDLGPELTEHWQSALATFSVVLDRWP
AVLERMGRIDAARRRTLLLDRVAARWREAQPAGFVCAAGVTDTAPAVARLLRCVSEMPGG
SVVFAGLDLTMPDEEWDALGPHKPDPDTGRTRRSIETHPQYALKLLLDRMGVGRGEVTVW
RGGGDYDAGPVRGRAIANAMAPADFTGKWTDLPAEDRRLSGVSTIELATPAEEAQAIALA
LREAVEEPGRTAALVTSDRALARRVAAHCRRWNILIDDTAGRPLSILLPGTFLLQLAEAA
AQHFAPLPLLALLKHPLIRGEMERVEWLDGVRALDKALRGPRPAPGLDGIAAHVADKPTA
SAFWTKAAPMLKAVGRTFGDGPQGLRSLLACLRECGQTLCGDALWTGPAGRAAAEFLAGY
EEEADHGPARVDPAELPGLLRSLFDEIAVRAIPREGQHPRLAIYGPIEARLQTADLMIAG
GLNEGVWPGRPAPDPWLAPRIRSLLGLVGLEQRIGIAAHDLAQAMGAPRAILTRARRDAS
GPTLASRFWLRLQAMAGERFEAHPNLARWAIELDRPEDYAPVDRPAPKPPAALRPTTISV
TEVDRLKADPYAFYARRVLRLSPLDPVDADPSAAWRGTAVHDILEMWWKEDRCDVEALRP
RALAMLRDQRTHPMMRALWQPRLIEAIDWIATKVAANADEGRHVLSAEGKGEVKLAGVTL
TGRFDRIDKAADGSLVVIDYKTGKPPSTAAVREGFSLQLGLLGLIAERGGFEGIAGRAGG
FEYWSLGRNRDGLGYVAMPVDPDGKRERIRTDEFVSIAAANFADAAGQWLTGDAPFTAKL
VPEYAPYAEYDQLMRRDEWYGRDR
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagccacgccgcccgaggctgcacaccattccggcgcatcgtggttttgccgat
gcgctggtcgccgggctgatgcggcgcagcggtggcgatccgctgacgctggcgcagggc
atgatcctgctgccgaccaatcgcggcgtccgcgcggtgaccgaggcgttcgtccgcgcg
agcggcgggggcctgatcctgccgcgcatggtcgcgctgggcgatcctgaactgggtgag
gcggccggctccgcgctcgacccggcggatgccgacgccccgccgccgcccgccatcgca
ccctccgcgcgccggatgatcctggcgcggctggtcgagcaggagcggcagcgcgcgggc
cagccggtgaccgcagccgaggcggtgcgactggcgggcgaccttgcccgcacgctggac
cagatgctggtcgaagaggtcgatccggccgaactcgccgcgctcgacctgggccctgag
ctgaccgagcattggcagtcggcgctggcgacattctcggtggtgctcgaccgctggccc
gccgtgctggagcggatgggacggatcgatgcggcgcggcggcgcaccctgttgctcgac
cgggtggccgcgcgctggcgtgaggcacagcccgcggggtttgtctgtgcggcgggcgtc
accgatacggcgcctgccgtcgcgcggctgctgcgctgcgtgtcggagatgccgggcggc
tcggtggtgttcgccgggctggacctgaccatgcccgacgaagaatgggatgcgctgggg
ccgcacaagcccgatcccgacaccgggcgcacccgccgttcgatagagacgcatccgcaa
tatgcgttgaagcttctgctcgaccggatgggcgtggggcggggcgaggtgacggtgtgg
cggggcggcggcgactatgacgcgggtccggtgcgcgggcgcgctatagccaatgccatg
gccccggccgacttcaccggcaaatggaccgacctgcccgccgaggaccggcggctgtcg
ggcgtctccaccatcgaactcgccacccccgccgaagaggcgcaggcgatcgcgctggcg
ctgcgggaggcggtcgaggagccgggccgtaccgccgcgctcgtcacttccgaccgcgcg
ctggcgcggcgggtggcggcgcattgtcgacgctggaacatcctgatcgacgatacggcg
ggacgacccttgtcgatcctgttgccgggcacctttctgctgcaactcgccgaagcggcg
gcgcaacatttcgcgccgctgccgctgctggcgctgctcaagcatccgctgattcgcggc
gagatggaacgggtcgaatggctcgacggcgtgcgtgcgctcgacaaggcgttgcgcggc
ccgcgtcccgcgccggggctggatggcatcgccgcgcatgtggccgacaagccgaccgct
tcggccttctggaccaaggccgcgccgatgctgaaggccgtcgggcggaccttcggcgac
ggaccgcaggggctgcgcagcctgctcgcctgtctgcgcgaatgcggccagaccttgtgc
ggcgatgcgctgtggaccggcccggcgggacgtgccgcggcggagttcctggcggggtat
gaagaggaagccgatcacggccccgcgcgcgttgatcccgccgagctgccgggcctgctc
cgcagcctgttcgacgagatcgcggtgcgcgccatcccgcgcgaggggcagcatccccgc
ctcgccatctatggcccgatcgaggcgcgtctccagaccgccgacctgatgatcgcgggc
ggcctgaacgagggtgtctggccggggcggcctgcgccggacccttggctggcgccgcgt
atccgctcgcttctgggactggtcgggctggagcagcggatcggcatcgccgcgcatgat
ctggcacaggcgatgggggcaccccgcgcgatcctgacccgcgcgcgtcgcgatgcgagc
gggcccaccctggcgtcgcgcttctggctgcgtttgcaggcgatggcgggcgagcggttc
gaggcgcatccgaaccttgcgcgctgggcgattgagctggatcgcccagaggactacgcc
cccgttgatcgccccgcacccaagccgcccgccgcgctgcgccccaccaccatctcggtg
acggaagtcgaccggctgaaggccgacccctacgccttctacgcgcgccgcgtgctgcgc
ctgtcgccgctcgatccggtcgatgccgatcccagcgcggcgtggcgcggcaccgccgtc
cacgacattctggaaatgtggtggaaggaggaccgctgcgacgtggaggcactgcgtccc
cgcgcgctcgcgatgctgcgcgatcagcggacccatccgatgatgcgggcactctggcag
ccgcgcctgatcgaggcgatcgactggatcgcgactaaagtcgctgcaaatgctgacgaa
ggccgccacgtcttgagcgccgaaggcaagggcgaggtcaagctggcgggtgtcacgctg
accgggaggtttgatcggatcgacaaggcggcagacggatcgctggtagtgatcgactac
aagaccggcaagccgccctccacggcggcggtgcgcgaggggttcagcttacagctcggc
ctgctcggcttgattgccgagcggggtggtttcgaaggcattgcgggccgcgcgggtggg
ttcgaatattggtcgctagggcgcaaccgtgatggtcttggctatgtcgcgatgccggtc
gatcccgatggcaaacgcgagcgcatccggacggacgagttcgtctccatcgctgcggcg
aattttgccgacgcggcggggcagtggctgacgggcgatgcgccgtttacggccaagctg
gtgcccgaatatgcaccctatgcggaatatgaccagctgatgcggcgggatgaatggtat
ggccgtgatcggtaa
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