Sphingomonas sanguinis: KV697_05280
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Entry
KV697_05280 CDS
T09609
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ssag
Sphingomonas sanguinis
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssag03032
]
KV697_05280
03036 Chromosome and associated proteins [BR:
ssag03036
]
KV697_05280
03400 DNA repair and recombination proteins [BR:
ssag03400
]
KV697_05280
DNA replication proteins [BR:
ssag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KV697_05280
Chromosome and associated proteins [BR:
ssag03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KV697_05280
DNA repair and recombination proteins [BR:
ssag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KV697_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
HU-CCDC81_euk_2
VWA_3
Glyco_transf_29
Motif
Other DBs
NCBI-ProteinID:
QXT36722
LinkDB
All DBs
Position
complement(1198476..1198748)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQELIATVADSSGLARGDAVKAVDAVFESITAALKKGDEVRLVGFGTFSVSKRKASTG
RNPRTGEPMTIKASSQPKFKPGKLLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggagctgatcgccaccgtcgccgactcctcgggcctggctcgcggcgat
gcggtcaaggcggtcgacgccgtgttcgagtcgatcaccgccgcgctgaaaaagggcgat
gaagtccgtctggtcggtttcggtaccttctcggtctccaagcgcaaggcctcgaccggc
cgtaacccgcgcaccggcgagccgatgaccatcaaggcgtcgtcgcagcccaagttcaag
ccgggcaagctgctgaaggactcggtcaactaa
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