Sphingomonas sanguinis: KV697_05520
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Entry
KV697_05520 CDS
T09609
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ssag
Sphingomonas sanguinis
Pathway
ssag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KV697_05520 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssag03400
]
KV697_05520 (xth)
Enzymes [BR:
ssag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KV697_05520 (xth)
DNA repair and recombination proteins [BR:
ssag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KV697_05520 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
A6_N
Motif
Other DBs
NCBI-ProteinID:
QXT36765
LinkDB
All DBs
Position
complement(1247091..1247864)
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AA seq
257 aa
AA seq
DB search
MKITTYNVNGIKARLPRLLEYLAEADADIVCLQELKASDDTFPIKDIEAAGYGAVWHGQK
SWNGVAVLARGAQPVERQRGLAGEDEDEHSRYLECEVNGLVVASLYLPNGNPQPGPKFDY
KLRWMERLASRARALLAEEVSAVLAGDYNVIPNDDDTFSVPAMASDALMQPESRQAYRRL
LAQGWTDSLRTRAPKGGVWTFWDYQAGSWQRDAGFRIDHLLLSPQAADRLVDAGVDKSYR
GREKASDHAPTWVKLRD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcactacctacaacgtcaacgggatcaaggcccgtctgccccgcctgctcgaa
tatctggccgaggcggacgcggatatcgtttgtcttcaggaactgaaggccagcgacgat
acctttccgatcaaggacatagaggccgccggatatggggcggtctggcacgggcagaag
agctggaacggcgttgcggtcctcgcgcgcggtgcccagccggtcgagcggcagcgcggg
ctggcgggcgaagatgaggacgaacatagccgctacctcgaatgcgaggtgaacggcctg
gtcgtcgcctcgctctatctgcccaacggcaatccccagccggggccgaaattcgattac
aagctgcgctggatggaacggctggcgagccgcgcgcgggcgttgctggcggaggaagtg
tccgccgtgctcgccggggattacaacgtcattcccaatgacgacgacaccttctccgtc
cccgccatggcgagcgatgcgttgatgcagccggagagccgtcaggcctatcgccggttg
ctcgcgcagggctggacggattcgctgcggacgcgcgcgcccaagggcggggtgtggacc
ttctgggactatcaggccggatcgtggcagcgcgatgcgggattccgcatcgaccatctg
ctgctcagcccgcaggccgccgaccggctggtcgatgcgggcgtcgacaagagctatcgc
gggcgggaaaaggccagcgaccatgccccgacctgggtaaagctgcgcgactga
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