Sphingomonas sanguinis: KV697_08005
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Entry
KV697_08005 CDS
T09609
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ssag
Sphingomonas sanguinis
Pathway
ssag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KV697_08005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssag03400
]
KV697_08005
Enzymes [BR:
ssag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KV697_08005
DNA repair and recombination proteins [BR:
ssag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KV697_08005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QXT37212
LinkDB
All DBs
Position
1731573..1732970
Genome browser
AA seq
465 aa
AA seq
DB search
MRIITLPAPDDFDAWRDAARGLIADSVPPDQVVWQVGDQPADLFGAVGDDTPTTATPRFN
VSRAFIDLARSVILSNGPERFALLHTALDRLRAQPRLIEDQADPLIRRLDRLAKAVRRDI
HKMRAFLRFRETEDDDGPRYVAWFEPEHHIVRANAAFFVNRFTTMRWSILTPEVSLHWDG
KTLTEGPGASRADAPEGDPTEAVWKTYYASIFNPARVKIGAMLKEMPRKYWKNMPETALV
SELIAGAQARETGMIATAKTDVRTGRGGNAQAAWAALRDEAMTCTRCPLYAPATQTVFGE
GPVDAPLMFVGEQPGDQEDLAGHPFVGPAGQVFDRAVAEAGIDRATAYVTNAVKHFKFEP
RGKRRIHSSPNAGEIQACRWWVEQERLLIQPRVTVALGATAARSLFGKVMTIGRERGKAL
TLPDGGMAFITVHPSYLLRLPDPAAKEVEYARFVEDLKLAAQAVS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcataaccctgcccgcccccgacgatttcgacgcgtggcgcgacgccgcacgc
gggctgatcgccgacagcgtcccacccgatcaggtcgtgtggcaggtcggcgaccagccc
gccgacctgttcggtgcggtcggcgacgacacgccgaccaccgccaccccccgcttcaac
gtctcccgcgcgttcatcgacctcgcgcgcagcgtcatcctgtccaacggcccggagcgg
ttcgcgctactccacaccgcgctcgaccgattgcgcgcgcagccgcggctgatcgaggat
caggccgacccgctgatccgccgcctcgaccggctggccaaggccgtgcggcgcgacatt
cacaagatgcgcgcgttcctgcgctttcgcgagaccgaggatgacgacggcccgcgctat
gtcgcctggttcgagcccgagcatcatatcgtgcgcgccaatgcggcgttcttcgtcaac
cgcttcaccacgatgcgctggtcgatcctgacgcccgaggtgtcgctccactgggacggc
aagacgctcaccgaaggtcccggcgcgagcagggccgacgcgcccgagggcgatccgacc
gaggcggtgtggaagacctattatgccagcatcttcaatcccgcccgcgtgaagatcggc
gcgatgctcaaggagatgccgcgcaaatactggaaaaacatgccggaaaccgcgttggtc
tccgaattgatcgcgggcgcgcaggcgcgggagacgggtatgatcgcaacggccaagacg
gatgtgcggaccgggcgcggcggcaatgcgcaggctgcgtgggcggcgctcagggacgag
gcgatgacctgcacccgctgtccgctctacgctcccgcgacccagacggtattcggcgaa
ggcccggtcgacgcgcccctgatgttcgtcggcgaacagcccggcgaccaggaggatctg
gcgggccatccctttgtcggccccgccggacaggtgttcgaccgcgcggtggcggaagcc
gggatcgaccgggcgacggcctatgtcaccaacgcggtcaagcatttcaagttcgagccg
cgcggcaagcgccgcatccacagctcgcccaatgctggcgaaatccaggcctgtcgctgg
tgggtcgaacaggaacgcctgctgatccagcctcgggtgacggtcgcgctgggggcgacg
gcagcgcggtcgctgttcggcaaggtcatgacgatcggccgcgaacgcggcaaggctctg
acgctgcccgatggcggcatggccttcatcacggtgcatccgagctatctgctccgcctg
cccgatccggcggcaaaggaggtcgaatatgcgcggttcgtcgaggatctgaagctggcg
gcgcaggcagtcagttaa
DBGET
integrated database retrieval system
