Sphingomonas sanguinis: KV697_10340
Help
Entry
KV697_10340 CDS
T09609
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ssag
Sphingomonas sanguinis
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssag03032
]
KV697_10340 (gyrB)
03400 DNA repair and recombination proteins [BR:
ssag03400
]
KV697_10340 (gyrB)
Enzymes [BR:
ssag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KV697_10340 (gyrB)
DNA replication proteins [BR:
ssag03032
]
Prokaryotic type
DNA Topoisomerases
KV697_10340 (gyrB)
DNA repair and recombination proteins [BR:
ssag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KV697_10340 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Motif
Other DBs
NCBI-ProteinID:
QXT34238
LinkDB
All DBs
Position
complement(2240673..2243165)
Genome browser
AA seq
830 aa
AA seq
DB search
MADTPQTNEYGASSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEALAGH
CDRIDIQLNADGSVSVTDNGRGIPTGIHPEEGVSAAEVIMTQLHAGGKFENTSDDNAYKV
SGGLHGVGVSVVNALSEFLDLTIWRDGEEHYMRFAHGDAVAPLKVVGKAEPGQKGTRVTF
LPSPATFKITEFDFAKLEHRYRELAFLNSGVRLFLTDARHEEPKTVELYYEGGIAAFVKW
LDRSKSPLFPEPIAIHGQRDAIGMDVALEWNDSYYENVLAFTNNIPQRDGGTHIAAFRAA
LTRTLNNYADKSGLLKKEKVTLTGDDMREGLTAIVSVKLPDPKFSSQTKDKLVSSEVRQP
LESLIADKLADWLEENPANARAIIAKVIDAAAAREAAKRARELTRRKGVMDIASLPGKLA
DCQERDPAKSELFLVEGDSAGGSAKQGRNRHFQAILPLRGKILNTERARFDRMISSKEIG
TLIQAMGTGIGRDDFNADKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPELIERGHLY
IAQPPLYKATKGRSEVYLKDDTALDEYLVEAGVSTMVLEGAGGARSGNDLKTLVDHARRM
RTLMRYVPRRYDASIIEVLALAGALDPVLTREQRMATVVETTRRLESGDHEARWSARLTE
DGGVHFERLWRGVTDHHIVEASFIASAEARKLHTLAAEQAESFAHAAKLVPLRNAATEPS
ADVVPTDEDGNATTLARGETRVARPSQLLEAILTSGRKGLAIQRYKGLGEMNAEQLWETT
LDPAVRSMLRVTSDDVAAADEVFSRLMGEVVEPRREFIQDNALNVANLDV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcagataccccccagacgaacgaatacggcgcctcttcgatcaaggtgctgaagggc
ctcgacgcggtgcgcaagcggccgggcatgtatatcggcgataccgacgacggctcgggc
ctccaccacatggtgttcgaggtttcggacaacgcgatcgacgaggcgctggcggggcat
tgcgaccgcatcgacattcagctgaacgccgacggctcggtcagcgtcaccgacaatggt
cgcggcatcccgaccggcatccaccccgaagagggcgtgtcggcggccgaggtcatcatg
acccagctgcacgcaggcggtaagttcgagaacacgtcggacgacaacgcctacaaggtg
tcgggcggtctgcacggcgtcggcgtgtcggtggtgaacgcgctgtccgaattcctggac
ctgaccatctggcgcgacggcgaggagcattatatgcgcttcgcccatggcgatgcggtt
gcgccgctcaaggtcgtcggcaaggcggagccggggcagaagggcacccgcgtcaccttc
ctgccgtcgcccgccaccttcaagatcaccgagttcgactttgcgaagctcgagcatcgc
tatcgcgagctggctttcctgaactcgggcgtccgactgttcctgaccgatgcgcggcat
gaagagcccaagacggtggaactctattacgagggcgggatcgccgccttcgtgaagtgg
ctggaccggtccaagtcgccgctcttccccgaacccatcgccatccatggccagcgcgat
gcgatcggcatggacgtcgcgctggagtggaatgacagctattacgagaacgtcctggcg
ttcaccaacaacatcccgcagcgcgacggcggcacgcatatcgcggcgttccgcgcggcg
ctgacccgcacgctcaacaattatgccgacaagtcgggcctcctgaagaaggagaaggtc
acgctgaccggcgacgacatgcgcgaaggcctgaccgcgatcgtctcggtcaagctgccc
gatccgaagttcagcagccagaccaaggacaagctggtctcctccgaggtgcgccagccg
ctggaatcgctgatcgccgacaagctggccgactggctggaggaaaatcccgcgaacgcg
cgtgcgatcatcgccaaggtgatcgacgcggcggcggcgcgcgaggcggccaagcgcgcc
cgcgagctgacccggcgcaagggcgtgatggacatcgcctcgctgcctggcaagctggcc
gactgccaggagcgcgatcccgccaagtccgaactcttcctggtcgagggtgactcggca
gggggctcggccaagcagggacgcaaccgccatttccaggcgatcctgcctttgcgcggc
aagatcctgaacaccgagcgcgcgcggttcgaccgcatgatctcgtccaaggaaatcggc
acgctgatccaggcgatgggcaccggcatcggccgcgacgacttcaacgcggacaagctg
cggtaccacaagatcgtcatcatgaccgacgccgacgtcgacggcgcgcatatccgcacg
ctgctgctgaccttcttctatcgccagatgcccgaactgatcgagcgcggccacctctac
atcgcccagccgccgctctacaaagcgaccaaggggcggtcggaagtctacctcaaggat
gatacggccctcgacgaatatctggtcgaggcgggcgtctccacgatggtgctggagggc
gcgggcggtgcgcggtccggcaacgacctgaagacgctggtcgatcatgcgcggcggatg
cggaccctgatgcgctacgtgccgcgccgctacgatgcctcgatcatcgaggtgctagcg
ctggcgggtgcgctcgaccccgtgctgacccgcgagcagcgcatggcgacggtggtcgag
accacgcgccgtctggagtcgggcgatcatgaggcgcgctggtcggcgcgtctcacggaa
gatggcggcgtgcatttcgagcggctgtggcgcggcgtgaccgatcaccacattgtcgag
gccagcttcatcgcctcggccgaagcgcgcaagctgcatacgctggccgccgaacaggcc
gagagcttcgcccatgccgccaagctggtgccgctgcgcaacgccgcgaccgagccgtcg
gccgatgtcgtgccgaccgatgaggacggcaacgccacgacgctggcacgcggcgaaacc
cgcgtcgcgcggccgagccagttgctggaggcgatcctgacttcgggccgcaaggggctg
gcgatccagcgctacaagggtctgggcgagatgaatgccgagcagctgtgggaaaccacg
ctcgatccggcggtccgctcgatgctgcgcgtgacctcggacgatgtcgcggcggcggac
gaggtgttcagccgtttgatgggcgaagtcgtcgagccgcgtcgcgagttcattcaggac
aacgcgctgaacgtggcgaatctggacgtgtaa
DBGET
integrated database retrieval system
