Sphingomonas sanguinis: KV697_10510
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Entry
KV697_10510 CDS
T09609
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ssag
Sphingomonas sanguinis
Pathway
ssag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KV697_10510 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssag03019
]
KV697_10510 (recQ)
03400 DNA repair and recombination proteins [BR:
ssag03400
]
KV697_10510 (recQ)
Enzymes [BR:
ssag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KV697_10510 (recQ)
Messenger RNA biogenesis [BR:
ssag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KV697_10510 (recQ)
DNA repair and recombination proteins [BR:
ssag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KV697_10510 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
DEAD
RQC
Helicase_C
RecQ_Zn_bind
ResIII
DNA_pol_A_exoN
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QXT34269
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All DBs
Position
2272685..2274454
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AA seq
589 aa
AA seq
DB search
MVADPLAKLHEVFGYNQFRGVQEQVVDRVLARQRTLAVMPTGAGKSLCYQLPAVMMDGCC
VVVSPLIALMHDQLRAAEAVGIRAATLTSVDQNRAETVARFRDGQLDLLYVAPERASSGH
FRELLGSAPLSLFAIDEAHCVSEWGHDFRPDYRLLEPLMDAFPEVPRLALTATADAHTRA
DIAKQLGIPTEGMIVSGFDRPNIRYAISPKANVNLQIARVVADTPGPGIVYAQTRAATEK
LAEALARTGRPVRAYHAGLDPAVRAKNQADFVASEDMVICATVAFGMGIDKPDVRFVAHA
GLPKSIEAYYQETGRAGRDGDPSVAHLFWGADDFARARQRIAEVEPERQPGERARLAALG
ALVETGGCRRRILLRHFGEDLVEDCGNCDNCLGSPDAVDATTVAQKFLSAVFRTGQLFGA
GYIEQVLTGQSTERSLMNGHEALSVWNIVSGDEAALLKPVHRALLLRDALRTNHHGGLEF
GPAARALIKGEARLSLVVPPKREKKGRRAAPVAANPADNPLFEALRAKRRELAQEAGVPP
YVIFHDSVLRDMAAQRPTSRAALSLLSGIGARKLDAYGEAFLAVIREAD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccgacccccttgccaagctccacgaagttttcgggtacaaccagttccggggt
gtccaggaacaggtggtcgaccgcgtgctcgcgcggcagcggacgctggcggtcatgccg
acgggtgctggcaagtcgctctgctaccagttgcccgccgtgatgatggacgggtgctgc
gtcgtggtcagcccgctgattgctttgatgcacgaccaactgcgcgccgccgaggcggtc
ggcattcgcgccgccaccctgaccagcgtcgaccagaaccgcgccgagaccgtcgcgcgc
ttccgcgacgggcagctcgacctgctctatgtcgcgcccgagcgcgcgtcgtcggggcat
ttccgcgagttgctcggctccgcgccgctcagcctgttcgcgatcgacgaagcgcactgc
gtcagcgaatgggggcatgacttccgccccgactatcgcctgctcgaaccgctgatggac
gcctttccagaggtgccccggctcgcgctgaccgcgaccgccgatgcgcatacccgcgcc
gacatcgccaagcagctgggcatcccgaccgagggcatgatcgtctcgggcttcgaccgg
cccaatatccgctatgcgatcagccccaaggcgaatgtgaacctgcagatcgcgcgggtg
gtcgccgacacgcccggccccggcatcgtctatgcccagacgcgcgcagcgaccgagaag
ctggccgaggcgctggcgcggaccggccgtccggtgcgtgcctatcatgccgggctggac
ccggccgtgcgcgcgaagaaccaggccgatttcgtggcgagcgaagacatggtgatctgc
gccaccgtcgccttcggcatgggcatcgacaagccggacgtccgcttcgtcgcgcatgcc
ggactgccaaaatcgatcgaggcctattatcaggaaaccggccgtgcgggccgcgacggc
gacccctcggtcgcgcatctcttctggggtgccgacgacttcgcccgcgcgcgccagcgc
atcgccgaggtcgagcccgaacgtcagccgggcgaacgcgcgcggctggcggcgctgggc
gcgctggtcgagacgggcgggtgccgccgccgcatcctgctgcgccacttcggcgaggac
ctggtcgaggactgcggcaattgcgacaattgcttagggagccccgatgccgtcgatgcg
acgaccgtagcgcagaaattcctctcggccgtgttccgcaccggccagttgttcggcgcg
ggctatatcgagcaggtgctgaccggccagtcgaccgagcgcagcctgatgaacggacat
gaggcgctgtcggtctggaacatcgtctcgggcgacgaggcggcgttgctgaagcccgtt
caccgcgcgctgctgctgcgcgacgcgctgcgcaccaatcaccatggcgggctggagttc
ggacctgccgcccgtgcgctcatcaagggcgaggcgcggctgtcgctggtcgtgccgccc
aagcgcgagaagaagggccgtcgcgccgcgccggtcgccgccaatccggcggacaatccg
ctgttcgaggcgctgcgcgccaagcgtcgcgagctggcgcaggaggcgggcgtgccgccc
tacgtcatcttccacgactcggtgttgcgcgatatggcggcacagcgaccgaccagccgc
gcggcgctgtcgttgctgtcggggatcggcgcgcgcaagctggatgcttatggcgaagcg
tttctggcggtgatccgcgaggcggactaa
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