Sphingomonas sanguinis: KV697_12145
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Entry
KV697_12145 CDS
T09609
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssag
Sphingomonas sanguinis
Pathway
ssag03030
DNA replication
ssag03410
Base excision repair
ssag03420
Nucleotide excision repair
ssag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KV697_12145 (polA)
03410 Base excision repair
KV697_12145 (polA)
03420 Nucleotide excision repair
KV697_12145 (polA)
03440 Homologous recombination
KV697_12145 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssag03032
]
KV697_12145 (polA)
03400 DNA repair and recombination proteins [BR:
ssag03400
]
KV697_12145 (polA)
Enzymes [BR:
ssag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KV697_12145 (polA)
DNA replication proteins [BR:
ssag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KV697_12145 (polA)
DNA repair and recombination proteins [BR:
ssag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KV697_12145 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KV697_12145 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DprA_N
HHH
Motif
Other DBs
NCBI-ProteinID:
QXT34559
LinkDB
All DBs
Position
2602100..2604874
Genome browser
AA seq
924 aa
AA seq
DB search
MPHLYLVDGSGYIFRAYHRLPPLTNKHGEPVGAVYGYTTMLWKLVDEINAADGPTHMAVV
LDKSSKTFRNDMYDQYKAHRPPPPPDLVPQFPMIRDATRAFSLPCIEEMGLEADDLIACY
ARAAMAQGWQVTIVSGDKDLMQLVEDGSLDMLDTMNNRRLGEAYVQEKFGVGPKQLGDVL
ALMGDSVDNVPGVPGVGPKTASKLIVEHGDLESVLAAAPEMKKGKLRDNLIEHAENARLS
KRLVTLECNAPLPQPLEELALHPTIPDAPLRAFLEHHGFRSLIAKMGQITDDAAPAPAAG
EAAPAAPMDDDEPCNLDGYTTVQDLATLDQWVADARHQGFVAIDTETSSTDATQAELVGV
SLCLAPNKACYIPLGHGGTDLLAEVPVQISVAAALERLKALCEDPSVLKIGQNLKFDMIV
LGERGIAVAPHDDTIVLSFDLDAGLHGHGMDELAATHLSHTCLAFKEVVGTGKKQLGFHE
VDLKLATRYAAEDADVTLRLWKRFKARLPMEQATRVYEMVDRPLVPVIAGMERRGIKVDR
DRLSQLSTEFAGQITALEGEIHGLAGTPFTIGSPKQLGEILFDKLGLKGGRKGKSGVYST
DVTELERLARDGGDAAEIVRKILEWRQLSKLKSTYTDALQAQINPKTGRVHTSYSLTGAQ
TGRLSSTEPNLQNIPIRTEVGRQLREAFIAEDGHVLIAADYSQIELRLAAHMADVPALRD
AFANGDDIHSLTAMELFGEVNRDTRGRAKTINFAILYGISRWGLAGRLDVSADEAQAMID
RYFERFPGINRYIAETLSSVREKGFTETLFGRKTHFPRIASRNQGERQGAERAAINAPIQ
GTSADIIKRAMVRMEPALAAAGLGHVRMLLQVHDELVFEAPEADTEAAGAVIREVMAGAA
EPAVSLSVPLGVEIGFGKSWGAAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgccccatctctatctcgtcgacggctccggctatatcttccgcgcctatcaccgcctg
ccgccgctgacgaacaagcatggcgagccggtgggggcggtgtacggctatactaccatg
ttgtggaagctggtggacgagatcaacgctgccgatgggccgacccatatggcggtggtc
ctcgacaagtcgtccaagaccttccgcaacgacatgtacgaccagtataaggcgcaccgg
cccccgcccccgcccgatctggtgccccagttcccgatgatccgcgacgccacccgcgcc
ttctcgctgccctgcatcgaggagatggggctagaggcggacgacctgatcgcctgctat
gcccgcgccgcgatggcgcaggggtggcaggtcacgatcgtctcgggcgacaaggacctg
atgcagctggtcgaggatggcagcctcgacatgctcgacacgatgaacaaccggcggctg
ggcgaggcgtacgttcaggagaaattcggcgtcgggccgaagcagctgggcgatgtgctc
gcgctgatgggcgacagcgtcgataacgtgccgggcgtgccgggtgtcggcccgaaaacc
gcctccaagctgatcgtcgagcacggcgacctcgaatccgtgctcgccgccgcgcccgag
atgaagaagggcaagctgcgcgacaacctgatcgaacatgccgagaatgcccggctgtcg
aagcggctggtcacgctggagtgcaacgcgccgctgccgcagccgctggaggaactggcg
ctgcatccgaccatcccggatgcgcccttgcgcgcgttccttgagcatcacggtttccgc
tcgctgatcgccaagatgggccagatcaccgacgacgccgcgcccgcccccgccgccgga
gaggccgcacccgccgcgccgatggacgatgacgagccgtgcaatctcgacggctatacc
acggtgcaggacctggcgacgctcgaccagtgggtggccgacgcgcgtcatcagggtttc
gtcgcgatcgataccgagaccagctcgaccgacgcgacccaggccgaactggtcggggtc
agcctgtgcctggcgcccaacaaggcgtgttatatcccgttgggacatggcggaaccgat
ctgctggccgaagtgccggtgcagatttccgtcgcggcggcgctggagcggctcaaggca
ctgtgcgaggacccgtccgtcctgaagatcggccagaacctgaaattcgacatgatcgtg
ctgggcgagcgcggcattgccgtcgcgccgcatgacgataccatcgtgctgagcttcgac
ctcgacgccgggctgcacggccacggcatggacgagctggccgcgacgcatttgtcgcac
acctgcctcgccttcaaggaggtggtcggcaccggcaagaagcagctcggctttcacgag
gtcgatctcaaactcgccacccgctacgccgccgaggatgccgacgtcacgctgcggctg
tggaagcggttcaaggcgcggctgcccatggagcaggcgacgcgcgtctacgagatggtc
gaccgcccgctcgtccccgtcatcgcaggcatggagcggcgcgggatcaaggtcgatcgc
gaccgcctgtcgcaactctcgaccgagttcgcgggccagatcaccgcgctagagggcgag
atccatggcctggcgggcacccccttcaccatcggcagccccaagcagctgggcgaaatc
ctgttcgacaagctgggcctgaagggcgggcgcaagggcaagtcgggcgtctattcgacc
gacgtgaccgaactcgaacggctggcccgcgacggcggcgacgcggcggagatcgtgcgc
aagatcctggaatggcgccagctgtccaagctgaagagcacctataccgacgcgcttcag
gcgcagatcaacccgaagaccggccgcgtccacaccagctacagcctgaccggcgcacag
accggccgcctgtcctcgaccgagccgaaccttcagaacatcccgatccgcaccgaggtc
ggacggcagctgcgcgaggcgttcatcgccgaggacggccatgtcctgatcgccgccgac
tattcgcagatcgagctgcggctcgccgcgcatatggccgatgtgcccgctttgcgcgat
gcgttcgccaatggcgacgacatccacagcctgaccgcgatggagctgttcggcgaggtc
aatcgcgacacgcgcgggcgggccaagacgatcaacttcgccatcctctacggcatttct
cgctgggggctggccggtcgcctagacgtgtcggcggacgaggcgcaggcgatgatcgac
cgctatttcgaacggttccccggcatcaaccgctatatcgccgagacgctgtcgagcgtg
cgcgagaagggatttaccgagacgctgttcggccgcaagacgcatttcccgcgcatcgcc
tcgcgcaaccagggcgagcgccagggggccgagcgcgccgcgatcaacgcgccgatccag
ggcaccagcgccgacatcatcaagcgcgccatggtccgcatggaacccgccctcgccgcc
gcggggctggggcatgtgcggatgctgctgcaggtacatgacgaactggtgttcgaggcg
cccgaggcggatacggaagcggcgggtgcggtgatccgcgaagtcatggcgggtgcggcc
gaaccggcggtgtcgttgtcggtgccgctaggcgtcgagatcggcttcggcaagagctgg
ggcgcggcgcattga
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