Sphingomonas sanguinis: KV697_12830
Help
Entry
KV697_12830 CDS
T09609
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ssag
Sphingomonas sanguinis
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
KV697_12830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssag03019
]
KV697_12830
03009 Ribosome biogenesis [BR:
ssag03009
]
KV697_12830
04131 Membrane trafficking [BR:
ssag04131
]
KV697_12830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssag04147
]
KV697_12830
Messenger RNA biogenesis [BR:
ssag03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
KV697_12830
Ribosome biogenesis [BR:
ssag03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
KV697_12830
Membrane trafficking [BR:
ssag04131
]
SNARE
SNARE associated proteins
Others
KV697_12830
Autophagy
Aggrephagy
Other aggrephagy associated proteins
KV697_12830
Exosome [BR:
ssag04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KV697_12830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_33
AAA_22
CDC48_2
AAA_5
AAA_2
AAA_14
TIP49
IstB_IS21
nSTAND3
NPHP3_N
AAA_28
RNA_helicase
Zeta_toxin
AAA_18
AAA_7
Mg_chelatase
DUF815
ABC_tran
AAA_24
AAA_3
AAA_11
TsaE
Sigma54_activat
AAA_19
AAA_30
AAA_17
AAA_25
Parvo_NS1
ATPase
NB-ARC
SLFN-g3_helicase
bpMoxR
PhoH
Viral_helicase1
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
QXT34677
LinkDB
All DBs
Position
2742812..2745103
Genome browser
AA seq
763 aa
AA seq
DB search
MADSDAPTRKIQVANSRPEDSGRGLAHVPRSLMAALGITEGDVIEIVGKQATPARAVAPY
PEDEGLDLLRIDGLQRANAGVGSGDFVEVRRVESKPATRVVFAPAQENLRLQGSAQALKR
TFFNRPLCQGDVVATAGQQRVTNMPPGVAQFMNAPAYALQEIRLAVVAASPKGVVHIDEN
TEVELRPEYEEPREARRADVTYDDIGGMASTIDQLREMVELPLRYPELFERLGVEPPKGV
LLHGPPGTGKTRLARAVANESDAQFFLINGPEIMGSAYGESEQRLREIFEEATKSAPSIV
FIDEIDSIAPKRDRVQGEAEKRLVAQLLTLMDGLEARANLVIIAATNRPEAIDEALRRPG
RFDREIVVGVPDERGRREILGIHTRGMPLGDKVDLNELARTTFGFVGADLAALTREAAIE
AVRRIMPRLNLEERTIPAEVLDTLSVTREDFLEALKRVQPSAMREVMVQAPTVRWEDVGG
LDTAQMKLKEGVELPLKDPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAQANFIA
TKSSDLLSKWYGESEQQITRLFARARQVAPTVIFIDELDSLVPARGGGLGEPQVTERVVN
TILAEMDGLEELQSVVVIGATNRPNLVDPALLRPGRFDELIYVGVPDKAGRRRILGIQTA
KMPLASDVDLDDVAARTDRFTGADLGDVVRRAGLIALRKSLGATQVNMAAFDEALTEARA
SVTPEMERDYEQIAAKLKQDAAAIQPIGFIAPGMLTPRGDKQP
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagcgacgcgccgacccgcaagatacaggtggccaatagccgccccgaggat
tcgggccggggtctcgcccatgtcccgcgcagcctgatggcggctttgggcatcaccgag
ggcgacgtgatcgagatcgtcggaaagcaggcgacacccgcgcgcgccgtcgcgccctat
cccgaggatgaggggctggacctgttgcgcatcgacgggctccagcgtgccaatgcgggc
gtcggctcgggcgatttcgtcgaggttcgccgggtcgaatccaagcccgcgacccgcgtc
gtcttcgcccccgcgcaggaaaacctgcggctgcaaggctcggcgcaggcgctcaagcgc
accttcttcaaccgcccgctctgtcagggcgatgtggtggcgacggcggggcagcagcgt
gtcaccaacatgccgccgggcgtcgcgcagttcatgaacgcgcccgcctatgcgctccag
gaaatccgcctcgcggtcgtcgcggccagccccaagggggtcgtccatatcgacgagaat
accgaggtcgagctgcgtcccgaatatgaggaaccgcgcgaggcgcggcgcgccgatgtc
acctatgacgatatcggcggcatggcctcgaccatcgaccagttgcgcgaaatggtcgag
ctgcccttgcgttaccccgaactgttcgagcggctgggcgtcgagccgcccaagggcgtg
ctgctccatggcccgcccggcaccggcaagacgcgactcgcccgcgcggtggccaacgag
tcggacgcacagttcttcctcatcaacggccccgagatcatgggctcggcctatggcgag
tcggagcagcggctgcgcgagattttcgaggaggcgaccaagtccgccccctcgatcgtg
ttcatcgacgaaatcgactcgatcgcgcccaagcgcgaccgcgtgcagggagaggcggag
aagcggctcgtcgcgcagttactgaccctgatggacgggctggaagcgcgcgcgaatctc
gtcatcatcgccgcgaccaaccggcccgaggcgatcgacgaggcgctgcggcggccgggt
cgcttcgaccgcgagattgtggtcggcgtgcccgacgagcgcggtcggcgcgagattctg
ggcatccacacgcgcggcatgccgctgggcgacaaggtcgatctcaacgagctggcgcgt
accaccttcggcttcgtcggcgccgatctggccgcgttgacccgagaggcggcgatcgag
gcggtgcggcggatcatgccgcgcctgaacctggaggaacggaccatccccgccgaggtg
ctcgacacgctgtcggtgacgcgcgaggatttcctggaggcgctgaagcgcgtccagccc
tcggcgatgcgcgaggtgatggtgcaggcgccgaccgtgcgctgggaggatgtcggcggg
ctggacaccgcgcagatgaagctgaaggaaggcgtcgagctgccgctgaaggacccggac
gcgttccggcgtctgggcatccggcccgccaagggcttcctgctctatggcccgccgggc
accggcaagaccttgctggccaaggcggtcgcacgcgaggcgcaggcgaacttcatcgcc
accaagtcgagcgatcttctgtccaaatggtatggcgagagcgagcagcagatcacccgg
ctgttcgcccgtgcgcggcaggtcgcaccgaccgtgatcttcatcgacgagctggactcg
ctggttccggcgcggggcggcgggctgggcgagccgcaggtgaccgagcgggtggtcaac
accatcctcgccgagatggacgggctggaggaactccagtcggtcgtcgtcatcggcgcg
accaaccggcccaacctcgtcgaccccgcgctgctgcggccggggcggttcgatgaactc
atctatgtcggcgtgcccgacaaggcggggcgtcggcgaatcctgggcatccagaccgcc
aagatgccgctggcgtcggacgtggacctggacgatgtggcggcgcggaccgatcggttc
accggcgccgatctgggcgacgtggtgcgccgcgcgggcctgatcgcgctgcgcaagtca
ctgggcgccacccaggtcaacatggcggcctttgacgaggcgctgaccgaggcgcgcgcc
agcgtgacaccggagatggagcgcgattacgaacagatcgccgccaagctcaagcaggac
gcggcggcgatccagccgatcggcttcatcgcgccgggcatgctgacgccgcgaggggac
aagcagccgtag
DBGET
integrated database retrieval system
