Sphingomonas sanguinis: KV697_14490
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Entry
KV697_14490 CDS
T09609
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ssag
Sphingomonas sanguinis
Pathway
ssag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KV697_14490 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssag03019
]
KV697_14490 (pnp)
03016 Transfer RNA biogenesis [BR:
ssag03016
]
KV697_14490 (pnp)
Enzymes [BR:
ssag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KV697_14490 (pnp)
Messenger RNA biogenesis [BR:
ssag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KV697_14490 (pnp)
Transfer RNA biogenesis [BR:
ssag03016
]
Prokaryotic type
tRNA degradation factors
KV697_14490 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QXT34975
LinkDB
All DBs
Position
3100921..3103254
Genome browser
AA seq
777 aa
AA seq
DB search
MFNTKKVAIEWGGKTLTLETGKVARQADGAVIATLGETVVLCAVTAAKNVKEGQDFFPLT
VHYQEKFSSAGRIPGGFFKRERGATERETLISRLIDRPIRPLFPEGFYNEINCICQVLSY
DGENEPDILALVAASAALTISGVPFMGPIGAARVGYVDGEYQLNPTDAEALAGDLDLVVA
ATHDAVMMVESEAKELSEEVMLGAVMFAHKASQQIIDAIIDLAEQAAKDPWELKVGDDQK
AVKAELKKLVGKDITAAYKLTDKQARQTALGEARAKAKAAMADRTPQEQLVAAKLVKKLE
AEIVRTAILKDGRRIDGRSTTQIRPIEAEVHFLPRSHGSALFTRGETQTIATTTLGTRDA
EQMIDGLNGLSYQHFMLHYNFPPYSVGEVGRFGAPGRREIGHGKLAWRALHPVLPSKEEF
PYTIRVTSDITESNGSSSMATVCGGSLSLMDAGVPLKRPVSGIAMGLILEGKDFAVLSDI
LGDEDHLGDMDFKVAGTSEGITSLQMDIKIAGITEEIMKVALAQAKEGRAHILGEMNKAL
GETRTELSAHAPRIETMTIDKSKIRDVIGTGGKVIREIVATTGAKVDIDDEGVIKISSSD
GSQIEAAMNWIKGIVEEAEVGKIYNGKVVNLVDFGAFVNFMGGKDGLVHVSEIKNERVEK
VSDVLTEGQEVKVKVLEIDPRGKVRLSMRVVDQETGAELEDNRPAREPREPRGDRGPRGD
REGGRGPRRDGGDRGDRGGEGRGGPRRDRGDRPRREGGEQAGSSEFAAPAFLTGDRD
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataccaagaaagtggccatcgagtggggcggcaagacgctgaccctcgaaacc
ggcaaggtggcccgtcaggccgacggcgcggtgatcgcgacgctgggcgagacggtcgtg
ctgtgcgccgtgacggccgcgaagaatgtgaaggaagggcaggacttcttcccgctcacc
gttcactatcaggagaagttctcgtcggcgggccgtatccccggcggtttcttcaagcgc
gagcgcggcgcgaccgagcgtgagacgctgatcagccgcctgatcgaccgtccgatccgc
ccgctgtttcccgagggtttctacaacgagatcaactgcatctgccaggtgctctcgtac
gatggcgagaacgagccggacatcctggcgctggtcgccgcgtcggccgcgctcaccatt
tcgggcgtgccgttcatgggcccgatcggcgcggcgcgcgtcggttatgtcgatggcgag
tatcagctgaacccgaccgacgccgaggcgctggccggtgacctggacctggtcgtcgcc
gccacacacgacgcggtgatgatggtcgagtcggaagccaaggaactgtccgaggaagtg
atgctgggcgccgtcatgttcgcgcacaaggcatcgcagcagatcatcgacgcgatcatc
gacctggccgagcaggccgcgaaggatccgtgggagctgaaggtcggcgacgaccagaag
gcggtcaaggccgagctgaagaagctggtcggcaaggacatcaccgcggcctacaagctg
accgacaagcaagcgcgccagaccgcgctgggcgaggcgcgcgccaaggcgaaggccgcc
atggccgaccgtacgccgcaggagcagctggtcgccgccaagctggtcaagaagctggaa
gccgagatcgtccgtaccgcgatcctgaaggacggccgccgcatcgacggtcgctcgacc
acccagatccgtccgatcgaggccgaggtccacttcctgccgcgttcgcacggctcggcg
ctgttcacgcgcggcgagacccagacgatcgcgaccacgacgctgggcacccgcgacgcg
gagcagatgatcgacggtctgaacggcctgtcgtaccagcacttcatgctgcactataac
ttcccgccctattcggtcggcgaagtgggccgcttcggcgcgccgggccgtcgcgagatc
ggccatggcaagctggcctggcgtgcgctgcacccggtgctgccgtcgaaggaggaattc
ccctacaccatccgcgtgaccagcgacatcaccgagtcgaacggctcgtcgtcgatggcc
accgtctgcggcggctcgctgtcgctgatggatgcgggcgttccgctgaagcgtccggtc
tcgggcatcgccatgggcctgatcctggaaggcaaggacttcgccgtcctgtcggatatc
ctgggtgacgaagatcacctgggcgacatggacttcaaggtcgccggcacctccgagggc
atcacctcgctccagatggacatcaagatcgccggtatcaccgaggagatcatgaaggtc
gcgctggcacaggccaaggaaggccgtgcgcacatcctgggcgagatgaacaaggcgctg
ggcgagacccgcaccgagctgtcggcccatgccccgcgcatcgagacgatgacgatcgac
aagtcgaagatccgcgacgtgatcggcaccggcggcaaggtgatccgcgagatcgtcgcc
accaccggcgccaaggtcgacattgacgacgagggcgtgatcaagatcagctcgtcggac
ggttcgcagatcgaagccgcgatgaactggatcaagggcatcgtcgaagaggccgaggtc
ggcaagatctacaacggcaaggtcgtcaacctggtcgatttcggtgcgttcgtgaacttc
atgggcggcaaggacggtctggtccacgtctcggagatcaagaacgagcgcgtcgagaag
gtctcggacgtcctgaccgaaggccaggaagtcaaggtcaaggtcctggagatcgatccg
cgcggcaaggtccgcctgtcgatgcgcgtcgtcgaccaggaaaccggcgccgagctggag
gacaaccgtccggcccgcgaaccgcgtgaaccgcgcggcgatcgtggcccgcgcggcgac
cgtgaaggcggtcgcggtccgcgccgtgacggcggtgatcgtggtgatcgcggcggcgaa
ggccgtggcggtccgcgtcgcgaccgcggcgaccgtccccgtcgtgaaggtggcgagcag
gccggttcgtccgaattcgccgctccggccttcctgaccggcgatcgcgactga
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