Sphingomonas sanguinis: KV697_14795
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Entry
KV697_14795 CDS
T09609
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
ssag
Sphingomonas sanguinis
Pathway
ssag02020
Two-component system
ssag02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KV697_14795 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KV697_14795 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssag03021
]
KV697_14795 (rpoN)
Transcription machinery [BR:
ssag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KV697_14795 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_IclR
Rv2175c_wHTH
HTH_31
Arg_repressor
Xre-like-HTH
Phage_CII
HTH_3
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QXT35030
LinkDB
All DBs
Position
complement(3165730..3167214)
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AA seq
494 aa
AA seq
DB search
MSLAPRLDIRQSQSLVMTPQLQQAIKLLTLSNLEVEAFIAEEVEKNPLLDASAVREVATP
ERPEREAPAGADELVAGTAPSEDRGLDLDYATESHQQDSVADGGTGPDGGLSLNGASGSG
GLGGEDGPDWDSLADDAPNLAEHLEAQIALILSGTDLTIAAHIIDQLDEAGYLTVPLDEI
AGRLGAPLTRVESVLKVVQSLDPTGVGARDLAECLALQAKEVDRYDPCMAKLIANLDLLA
RGELARLKRICGVDDEDMADMIRELRGYDPKPGCRYGGEPSQAVVPDLFITRTKAGWGIE
LNTATLPRVLVNRRYYQELRHGPQDKGSKAWLADCLASANWLMKALDQRQRTIIRVATEI
VKQQEAFFLHGVAHLKPLTLARVAEAIGMHESTVSRVTSNKYLSCARGLFELKFFFTSGI
AAADGGDAVSAEAVKSAIKALIANEGAKILSDDTLVELLQAKGFDIARRTVAKYRESLGI
GSSVQRRRARALAG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgccccgcgtctcgacatccgccagtcgcaatcgctggtgatgacgccgcag
cttcagcaggccatcaagctgctgacgctgtcgaatctggaggtcgaggcgttcatcgcc
gaggaggtggagaagaaccccctgctcgacgccagcgcggttcgcgaggtcgcgaccccc
gaacgccccgagcgtgaggccccggcgggcgcggacgagctggtcgccgggaccgcgccc
agcgaagaccgtggcctcgacctggactacgccacggaaagccatcagcaggacagcgtc
gccgatggcggcaccgggccggacggcggcctgtcgttgaacggcgcaagcgggagcggc
gggctgggtggcgaggacgggccggactgggattcgctggccgatgacgcccccaatctg
gccgagcatctggaggcgcagattgcgctgatcctgtcgggcaccgacctgaccatcgcc
gcgcatatcatcgaccagctggacgaggcgggctatctgaccgttccgctggacgaaatc
gccgggcggctgggcgcccccctcactcgcgtcgaatcggtgctgaaggtggtgcagagc
ctggaccccaccggcgtcggcgcgcgcgatctggccgagtgcctcgcgctgcaggccaag
gaggtcgatcgctacgacccgtgcatggccaagctgatcgccaatctcgatctgttggca
cgcggcgaactggcgcgtctgaagcgcatctgcggcgtcgatgacgaggacatggcggac
atgatccgcgagttgcgcggctacgatcccaagcccggctgtcgttatggcggcgagccg
tcccaggcggtggtgcccgacctgttcatcacccggaccaaggcgggctggggcatcgag
ctgaacaccgccaccctgccccgcgtgctggtcaaccgccgctattatcaggaactgcgc
cacggcccgcaggacaaggggtccaaggcgtggctggccgattgcctggccagcgcgaac
tggctgatgaaggcgctcgaccagcggcagcggacgattatccgcgtcgcgaccgagatc
gtgaagcagcaggaagccttcttcctccacggcgtcgcccatctgaagccgctgacgctt
gctcgcgtcgccgaggcgatcgggatgcacgaatcgaccgtcagccgcgtgaccagcaac
aaatatctcagctgcgcgcgcggcctgttcgagctgaaattctttttcaccagcggcatc
gcggcggcggacggcggcgacgcggtatcggcggaggcggtgaagagcgcgatcaaggca
ttgatcgccaacgaaggcgccaagatcctgtccgacgacacgctggtcgaactgcttcag
gccaagggcttcgacatcgcccggcgcaccgtcgccaagtatcgcgagtcgctgggcatc
ggcagctcggtccaacgccgccgcgcccgcgcgctggccgggtga
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