Sphingomonas sanguinis: KV697_14815
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Entry
KV697_14815 CDS
T09609
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ssag
Sphingomonas sanguinis
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssag03016
]
KV697_14815
Enzymes [BR:
ssag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KV697_14815
Transfer RNA biogenesis [BR:
ssag03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KV697_14815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QXT35033
LinkDB
All DBs
Position
complement(3169519..3170139)
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AA seq
206 aa
AA seq
DB search
MTVHLHEEDIPADLFAPGASIAVDTETMGLITPRDRLCVVQLSDGGPDEHLVRFSPDSDY
AAPNLRALLADPARLKLYHFGRFDIAAIRHYLGVVAAPVYCTKIASRLIRTYTDRHGLKE
LVRELLGVELSKAQQSSDWGAPELSDAQREYAASDVRYLHRMKVELDKRLEREGRMELAQ
ACFDFLPARAELDLAGWPEIDIFAHA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcacctgcacgaagaagacattcccgccgatctgttcgcccccggcgcctcg
atcgccgtcgataccgagacgatgggcctcatcacgccgcgcgaccggctgtgcgtcgtc
cagctgtcggacggcggtcccgacgagcatctggtgcgcttcagccccgacagcgactat
gccgcgccgaaccttcgcgcgctgcttgccgatccggcgcggttgaagctctatcatttc
gggcggttcgatatcgccgcgatccgacattatctgggcgtggtcgccgcccccgtctat
tgcaccaagatcgcctcgcggctgatccgcacctataccgaccgccacggcctgaaggag
ctggtccgcgaactgctcggcgtcgagctgtccaaggcgcagcaatcgtcggactggggc
gcgcccgagctgtccgatgcgcagcgcgaatatgccgcctcggacgtgcgctatctgcac
cgcatgaaggtcgagctcgacaaaaggctggagcgtgagggccggatggaactggcgcag
gcctgtttcgatttccttcccgcccgcgccgagctggacctggcgggctggcccgagatc
gatatcttcgcccacgcctga
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