Sphingomonas sanguinis: KV697_15220
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Entry
KV697_15220 CDS
T09609
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssag
Sphingomonas sanguinis
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssag03032
]
KV697_15220 (topA)
03400 DNA repair and recombination proteins [BR:
ssag03400
]
KV697_15220 (topA)
Enzymes [BR:
ssag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KV697_15220 (topA)
DNA replication proteins [BR:
ssag03032
]
Prokaryotic type
DNA Topoisomerases
KV697_15220 (topA)
DNA repair and recombination proteins [BR:
ssag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KV697_15220 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QXT35109
LinkDB
All DBs
Position
complement(3246306..3248915)
Genome browser
AA seq
869 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGSDYRVLASYGHVRDLPPKDGSVDPDQNFSMEWENYADKAR
QLKAIADEAKKADRLILATDPDREGEAISWHVQEVLKNRKALPDKVERVTFNAITKPAIL
HAMQNPRELDTDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLIVSRE
REIEAFRPQEYWSVTADMEQDGTPFVARLVQWEGKKLDRLSIGNEGDATRAKADVEAGRF
QVQSVETKPATRNPPPPFTTSTLQQEAARKLGFSADHTMRIAQQLYEDGAITYMRTDGVQ
MDGSAISAARKAVAERYDASYVPDKPRMYQSKAKNAQEAHEAIRPTDFSRDRAGSGDHGR
LYDLIWKRALASQMASARMERTTIDMADGTGRHVLRATGQVVLFPGYLALYEEGQDDSQD
EEARRLPRLREGDAPAKKEVKAEQHFTQPPPRFSEASLVKRMEELGIGRPSTYASIIKTL
KDRAYVRVEKNRFFAEESGRLVTAFLERFFEKYVGYDYTAELEEELDDVSGGRAQWQAVL
DAFWRDFKPRTSEVMEQQPSAITAELDQFLAPYLFPEKADGSDPRLCPNCGEGKLALRGG
RFGAFIACSNYPECKYTRRFAQGGEGAGEDTGPETLGQDPETGLPVERKSGRFGPYIQLG
EGKDAKRASIPKDVDLDLEWALKLLSLPRTIGNHPETGEPITASIGRYGPYLAHSGKYAR
LTSTAEVFETGMNAAVVKLAEAAAGGGRGARNTASREPLKVLGKHPRTEAEIKLMEGRYG
PYVTDGETNATIPKTVDKDQLTLEEAAQLIDARAAAAPARKKPAKKAAAKKAPAKKTAEK
TTAEKKAPAKKAPAKKAPAKKAVAKTSEA
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgtcatcgtcgaatcgcccgccaaggcgaagaccatcgagaaatatctgggt
tcggactaccgcgtcctggcgagctatggtcacgtccgcgacctgccgcccaaggacggc
tcggtcgaccccgaccagaatttttcgatggagtgggaaaattacgcggacaaggcgcgc
cagctgaaggcgatcgccgacgaggccaagaaggccgacagattgatcctggccaccgac
cctgaccgcgagggcgaggcgatttcgtggcacgtgcaggaggttctgaagaaccgcaag
gcgctgcccgacaaggtggagcgcgtcacgttcaacgcgatcaccaagcccgccatcctc
cacgcgatgcagaatccgcgcgagctggataccgacctgatcgacgcctaccgcgcgcgc
cgggcgctcgactatctggtcggcttcaccctgtcgccggtgctgtggcgcaagctcccc
ggcgccaagtcggcgggccgcgtccagtcggtggcgctgcgcctgatcgtcagccgcgag
cgcgagatcgaggcgtttcgcccgcaggaatattggtcggtgacggccgatatggagcag
gacggcacgcccttcgtcgcgcgtctggtccagtgggagggcaagaagctcgatcgcctg
tcgatcggcaatgagggcgacgcgacccgcgccaaggcggatgtcgaggcgggccggttc
caggtccagtcggtcgagaccaagcccgcgacacgcaacccgccgccgcccttcaccacc
tcgaccctgcaacaggaggccgcgcgcaagctgggcttctcggccgatcacacaatgcgg
atcgcgcagcagctctatgaggacggtgcgatcacgtacatgcgtaccgatggcgtccag
atggacggatcggccatctcggcggcgcgcaaggcggtggccgagcgctacgacgcctcc
tacgtccccgacaagccgcgcatgtaccagtccaaggcgaagaacgcgcaggaagcgcac
gaggcgattcgcccgaccgacttctctcgcgatcgtgcaggatcgggcgatcatggccgc
ctctacgacctgatctggaagcgtgcgctggcgtcgcaaatggcctcggcacggatggag
cgcaccaccatcgacatggccgacggcaccggccgtcacgtcctgcgcgcgaccggccag
gtcgtgctcttccccggctatctggcgctctatgaagaaggccaggacgacagccaggac
gaagaggcgcgccgcctcccccgcctgcgcgagggcgatgcccccgccaagaaggaggtc
aaggccgagcagcacttcacccagccgccgccgcgcttctccgaagcctcgctggtcaag
cggatggaagaactcggcatcgggcgtccgtccacctatgcctcgatcatcaagacgctg
aaggaccgggcctatgtccgcgtcgagaagaaccgtttcttcgccgaggagagcgggcga
ctggtgacggcgttcctggagcgcttcttcgagaaatatgtcggctacgactataccgcc
gagctggaagaggaactggacgacgtgtccggcggccgcgcccagtggcaggcggtgctc
gacgccttctggcgcgacttcaagccgcgcacgtccgaagtgatggagcagcagccctcg
gcaattaccgccgaactggatcaattcctcgcgccctatctgttccccgaaaaggcggac
ggatcggacccgcgcctctgccccaattgcggcgaaggcaagctggccttgcgcggcggt
cgattcggcgcgttcatcgcctgctctaactatccggaatgcaaatatacccgccgattc
gcccagggcggcgaaggggctggcgaggataccgggccggaaacgctcggtcaggatccc
gaaaccgggctgcccgtcgagcgcaagtcggggcggttcggcccctatatccaactgggc
gagggcaaggacgccaagcgcgcttccatccccaaggatgtcgatctcgacctggaatgg
gcattgaagctgctcagcctgccgcggaccatcggcaaccacccggaaacgggcgagccg
atcaccgcctcgatcgggcgctatggcccctatctggcgcatagcggcaagtacgcacgc
ctgacctcgaccgccgaggtgttcgagacaggcatgaacgccgctgtggtcaagctggcc
gaagcggcggcaggcggcgggcgcggtgcacgcaacacggcctcgcgcgaaccgctcaag
gtgctgggcaagcatccgcgcaccgaggcggagatcaagctgatggaggggcgctacggc
ccttacgtcaccgatggcgagacgaatgcgaccatccccaagacggtcgacaaggaccag
ctgacgctggaggaagccgcgcaactgatcgatgcgcgggcggcggccgctccggctcgc
aagaaaccggcgaagaaggcagcagcgaagaaggcacccgccaagaagacggcggagaag
acgacggcggaaaagaaagcgccggccaaaaaggctccagccaagaaagcccctgccaag
aaggctgtggcgaagacgagcgaggcctga
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