Sphingomonas sanguinis: KV697_16295
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Entry
KV697_16295 CDS
T09609
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssag
Sphingomonas sanguinis
Pathway
ssag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KV697_16295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssag03021
]
KV697_16295
03400 DNA repair and recombination proteins [BR:
ssag03400
]
KV697_16295
Enzymes [BR:
ssag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KV697_16295
Transcription machinery [BR:
ssag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KV697_16295
DNA repair and recombination proteins [BR:
ssag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KV697_16295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QXT35292
LinkDB
All DBs
Position
complement(3484233..3485297)
Genome browser
AA seq
354 aa
AA seq
DB search
MSVNAKNWQELKKPNALEKKGGDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAAV
TSIKIENVLHEFSSLAGVREDVTDIVLNVKQLAIRMQGEGPKRLQLSATGPATVKAGDIA
VSGDIEVMNKDLVICHLDEGATFNMELTADIGKGYVPAASNRPADAPIGLIPVDALYSPV
RQVSYKVDPTRVGQDLDYDKLTLSVETDGTVTPEDAVAYAARILQDQLALFVHFDDSALT
RAAPVGQAAIPAAGGEPQSDAQQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVGKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMEIPGWPPENIEEMAKKLEQEIMG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtcaacgcaaagaactggcaggaactgaagaagcccaacgcgctcgagaaaaag
ggcggcgatggcaagcggaaggcgacgttcgtcgccgaaccgctggagcgtggcttcggc
ctgacgctgggcaacgcgcttcgccgcgtgctcctgtcgtcgctccagggcgcggcggtc
acctcgatcaagatcgagaacgtgctgcacgagttctcgtcgctcgccggtgtgcgtgaa
gacgtcaccgacatcgtgctgaacgtcaagcagctcgcgatccgcatgcagggcgaaggc
cccaagcggctccagctgtcggcgaccggtcccgccaccgtcaaggccggcgacatcgcc
gtgtcgggcgacatcgaggtcatgaacaaggacctggtgatctgccatctcgacgaaggc
gcgacgttcaacatggaactgaccgccgacatcggtaagggctatgtccccgccgcgtcg
aaccgtccggccgatgcgccgatcggtctgatcccggtcgatgcgctttactcgccggtc
cgtcaggtgtcgtacaaggtcgatccgacccgcgtcggccaggacctcgactatgacaag
ctgacgctctcggtcgagaccgacggcaccgtcactccggaagacgccgtggcctatgcc
gcgcgcatcctccaggaccagctggcgctgttcgtgcacttcgacgattcggcgctcacc
cgcgcggcccccgtgggccaggcggcgatccccgccgccggtggcgagccgcagagcgac
gcgcagcagatcaaccgttaccttctcaagaaggtcgacgagctggaactgtcggtgcgt
tcggcgaactgcctcaagaacgacaacatcatctatatcggcgatctggtcggcaagacc
gaagccgagatgctgcgcaccccgaatttcggccgcaagtcgctgaacgaaatcaaggaa
gtgctgtcgtccatgggtctgcgcctgggcatggaaatccccggctggccgcccgagaat
atcgaggaaatggccaagaagctggaacaggagatcatgggctga
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