Sphingomonas sanguinis: KV697_19890
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Entry
KV697_19890 CDS
T09609
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ssag
Sphingomonas sanguinis
Pathway
ssag00521
Streptomycin biosynthesis
ssag00523
Polyketide sugar unit biosynthesis
ssag00525
Acarbose and validamycin biosynthesis
ssag00541
Biosynthesis of various nucleotide sugars
ssag01100
Metabolic pathways
ssag01110
Biosynthesis of secondary metabolites
ssag01250
Biosynthesis of nucleotide sugars
Module
ssag_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ssag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KV697_19890 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KV697_19890 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
KV697_19890 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KV697_19890 (rfbB)
00525 Acarbose and validamycin biosynthesis
KV697_19890 (rfbB)
Enzymes [BR:
ssag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
KV697_19890 (rfbB)
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Ortholog
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
QXT38001
LinkDB
All DBs
Position
pNP2-R2:67351..68403
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AA seq
350 aa
AA seq
DB search
MRIFVTGGAGFIGSALVRHLIENTTHEVLNFDKLTYAGTLTTVERVAASERYQFVQGDIC
DAGAVRTAIETFRPDIITHLAAESHVDRSIDGPGAFVQTNVVGTYTMLAEARAWWLSLDD
AGKAAFRFHHISTDEVYGTLGDTGLFTEETPYDPRSPYSASKAGSDHLVSAWGHTFGLPV
LITNCSNNYGPYHFPEKLIPLMIAKALDGEPLPIYGKGDQVRDWLYVEDHVRALQAVFER
GEPGRTYNVGGHNERQNIEVVRTLCAILDELRPRNDGKSYADQMTEVADRPGHDKRYAID
ASRIGAELGWTPVETFETGIRKTVQWYLANESWWRPLVANKASERRGVAA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatattcgtcaccggcggtgccggcttcatcggctcggcactggtccgtcatctg
attgagaacaccacgcatgaggtgctgaacttcgacaagctgacctatgctggcacattg
accacggtcgaacgggtcgccgcgagcgagcgttaccagttcgtccagggcgatatctgc
gatgccggcgcggttcgcacggcgatcgagacgttccgccccgacatcatcacgcatctg
gccgccgaaagccatgtcgaccgctcgatcgatggcccaggtgcgttcgtgcagaccaac
gtggtgggcacctacacgatgctggccgaagcacgcgcctggtggctatcactggacgat
gcgggcaaagccgcgttccgcttccatcatatttccaccgatgaggtgtacgggacgttg
ggggatacgggcctgttcaccgaagagacgccctatgacccacggtcgccctattcggcg
tcgaaggctgggtcggaccacctcgtcagcgcatggggccataccttcggcctgccagtc
ctgatcaccaactgctcgaacaattacggcccctatcatttcccggaaaagctgatcccg
ctgatgatcgccaaggcactggatggcgagccgctgccgatctacggcaagggcgatcag
gtccgcgactggctgtacgtcgaagatcatgtccgtgcgcttcaggcggtgttcgagcga
ggcgagccgggccggacctacaatgtcggcggacataacgaacgacagaatatcgaggtc
gtcaggacgctctgcgccattctggacgaactgcgtccccgcaacgacggcaagagctat
gccgaccagatgaccgaggtcgccgaccgcccgggccatgacaagcgttatgcgatcgac
gcctcgcgcatcggcgcagagctgggctggaccccggtcgagaccttcgagaccggaatc
cgcaagaccgtgcaatggtatctggcgaacgaatcctggtggcgtccgctggtcgccaac
aaggcgtcggaacgccgcggcgtagccgcctga
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