Streptococcus salivarius HSISS4: HSISS4_00765
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Entry
HSISS4_00765 CDS
T04634
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ssah
Streptococcus salivarius HSISS4
Pathway
ssah03410
Base excision repair
ssah03430
Mismatch repair
ssah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HSISS4_00765 (recJ)
03430 Mismatch repair
HSISS4_00765 (recJ)
03440 Homologous recombination
HSISS4_00765 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssah03400
]
HSISS4_00765 (recJ)
DNA repair and recombination proteins [BR:
ssah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HSISS4_00765 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HSISS4_00765 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HSISS4_00765 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ALR79777
LinkDB
All DBs
Position
827523..829724
Genome browser
AA seq
733 aa
AA seq
DB search
MITSTYDWKINTKEPDAGFFKLAKEHGLAETAAKIAYERGVTTEEALEEFLKADLSHLHD
PYLLHDMDKAVARIRQAIENYEQILVYGDYDADGMTSASIVKEALEMMGAEARVYLPNRF
TDGYGPNESVYKYFIEQEGISLIVTVDNGVAGNEAIAYAQEQGVDVIVTDHHSMPAQLPD
AYAIVHPEHPDADYPFKYLAGCGVAFKLATALLETIPTEMLDLVAIGTIADMVSLTDENR
IMVKVGLEILKTTERIGLQELLRISDVDPTTISEETVGFKLAPQLNALGRLDDPNPAIEL
LTGFDDEEAQAIALEINAKNEERKEVVQKIFDEAMTMVDLDKPVQVLAKEGWHPGVLGIV
AGRIMEQISQTVVVLNIEDGLAKGSARSLESINIFHALDDHRDIFTAFGGHAGAAGMTLP
EENLGQLSDILCHYVYDNDIDTSAKNTLNLDEELQLSELSLDSIKSLEKLAPFGMDNKKP
VFWLHDITVTQARTMGQNGAHLKFKVKQGKDSFDVVAFNKGNLLQEFQQAQGLELAVTLS
VNVWNGQTTLQLMLEDARVDGVQLFDFRSKNMALPEGLPTVEEASDTEPAVVLNTLPDSA
TEVKEWFEGKDFQAIYFKNSIKEAYYLTGYGTREQFARLYKTIYQFPEFDVRYKLDELSH
YLKIDKILLIKMIQIFDELDFVTIDNGVMTVNKEAEKREIEDSKIFQDLKHLVKFQELMA
LGTPQEIYDWLYK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgattacatcaacgtatgattggaaaataaacacaaaagagccagatgctggctttttt
aaacttgccaaagaacatgggctggcagaaacagcagccaagattgcctatgaacgtggc
gtgacgacagaagaagcccttgaagagtttcttaaggctgatctatcacatcttcatgac
ccttatcttcttcatgatatggacaaggcagtggctaggattcgtcaggccattgaaaat
tacgagcaaatcttagtctatggagactatgatgcggatgggatgacatcagcatcgatt
gtcaaggaagctcttgaaatgatgggcgctgaggctcgagtctatttgcctaaccgtttc
acagatggttatggaccaaacgaaagtgtctacaagtatttcattgagcaggaaggcatt
tcactcattgttacagtggataatggagtagcgggtaatgaggctattgcttatgcgcaa
gagcaaggtgtggacgttatcgttacagaccatcatagtatgccggcacagcttccagat
gcctatgccattgtccatccagagcatccggatgccgattatccttttaaatatttggca
ggatgtggtgtagctttcaaattggcaactgccctccttgaaactattcctacagagatg
ttggacttggtagccattggcaccattgctgatatggttagcctaacggatgaaaatcgt
attatggtcaaggtaggtctggaaattctcaagactactgagcgtattggacttcaagaa
ttgctccgcatttcagatgtggacccaacaacgatttccgaagaaacggtaggctttaaa
ctggctcctcaactcaatgccttgggacgcttagatgatccaaatccagccattgaacta
ctgactggatttgatgatgaggaagctcaagccattgctttggaaatcaatgctaaaaat
gaagaacgtaaggaagttgttcaaaaaatctttgatgaagctatgaccatggtagacttg
gacaaaccagttcaggttttggccaaggaaggttggcatcctggcgtcctcggtattgtg
gcagggcgcatcatggaacaaatcagccagacagtagtggttttgaatattgaagatggc
ttggctaagggatcagcccgtagtttggaatcgattaatatcttccatgctcttgatgac
caccgagatatctttactgcttttggaggacacgctggagcagctgggatgacccttccg
gaggaaaatcttggtcaactctcagatattttgtgccattatgtctacgataatgacatt
gatacaagtgccaaaaatacgcttaatttagatgaggagcttcaactcagcgagcttagc
ttggatagcattaagagccttgaaaaactagcaccttttggtatggataataaaaagcca
gtcttttggctacatgatattaccgttactcaagctaggacaatgggacaaaatggagcc
catcttaagtttaaggttaaacaaggcaaggatagctttgacgttgtcgcttttaataaa
ggtaatctacttcaagaattccaacaggctcagggtttggaattggcagtgaccttgtct
gttaatgtttggaatggtcagacaacgctccagctcatgctagaagatgcgcgtgtagat
ggtgttcaattatttgattttcgctcaaaaaacatggcactgcctgaaggcctaccaacg
gtagaagaagcatcagacactgaacctgcggttgtcctcaacaccttacctgattcagcg
acagaagtaaaagagtggtttgaaggtaaagatttccaggctatttattttaagaatagt
attaaggaagcctattatctgacaggttatggaactagagagcaatttgcaagactctat
aaaaccatttaccaattcccagaattcgatgttcgctataaactggatgagctcagtcat
taccttaaaatcgataagatacttctgattaagatgattcagatttttgatgaattggat
tttgtgactattgataatggtgttatgacagtcaataaagaagctgaaaaacgtgagatt
gaggacagcaagattttccaagatcttaaacatctcgtcaagttccaagaacttatggct
ttagggacaccacaagaaatttatgactggctttataagtag
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