Streptococcus salivarius HSISS4: HSISS4_00788
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Entry
HSISS4_00788 CDS
T04634
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssah
Streptococcus salivarius HSISS4
Pathway
ssah03030
DNA replication
ssah03430
Mismatch repair
ssah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HSISS4_00788 (dnaE)
03430 Mismatch repair
HSISS4_00788 (dnaE)
03440 Homologous recombination
HSISS4_00788 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssah03032
]
HSISS4_00788 (dnaE)
03400 DNA repair and recombination proteins [BR:
ssah03400
]
HSISS4_00788 (dnaE)
Enzymes [BR:
ssah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HSISS4_00788 (dnaE)
DNA replication proteins [BR:
ssah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HSISS4_00788 (dnaE)
DNA repair and recombination proteins [BR:
ssah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HSISS4_00788 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ALR79800
LinkDB
All DBs
Position
849752..852862
Genome browser
AA seq
1036 aa
AA seq
DB search
MFAQLDTKSVYSFMDSVVDLNSYVARAKELGYQALGLMDRDNLYAAYHFAQLASRNGLRP
LIGMEANLFYEGRKIPFRLLAKNNQGYKNLMKLATELSSGQRELTAFSDYLNAIALILPS
EDWESGMTLGSEVFIGVRPEDAGKEFDYPVVPLHTVRYFENADRSTIQMLHAISQNVSLS
EASICPMNQLLFSPQEMESAYSDIPEALNNLEQLVSDITYQFDTDLKLPRFNRDMPAVDQ
LSQLAQSGLESKKLTSAVYQERLDKELSIIHQMGFDDYFLIVWDLLRFGRSRGYYMGMGR
GSAAGSLVAYVLDITGIDPVKNDLLFERFLNEERYSMPDIDIDLPDTYRSEFLHYVRDRY
GSKHSAQIVTFSTFGAKQAIRDVFKRFGAKEFELSQLSKKISFRDNLTSVYEKNMSFRQL
INQRQEFQRAFEIAKAIEGQPRQTSIHAAGIVMSDDDLTNHIPLKAGEDMMVTQYDASAV
EANGLLKMDFLGLRNLTFVQKMKEKLEEEQGITIDIKSIDLEDPQTLALFASGKTKGIFQ
FEQAGAINLLKRIKPVKFEEVVATTSLNRPGASDYTDNFIARKYGKEKVDLIDPVVAPIL
EPTYGIMLYQEQVMQIAQVFAGFTLGKADLLRRAMSKKDANEMSKMSEEFMEGSRQLGRD
PQIAERLFSMMAKFAGYGFNRSHAYAYSALAFQLAYFKTHYPQIFYDVMLNYSSSDYIKD
AIENGFSLASLDINRIPYLDKISNGKIVLGLKTIKGLPRDFALWIIEDRKQNGKYISIED
FLTRIPSKYQKVDILTPLIQIGLFDIFEPNRQKIIGNLNNLFTFVNELGSLFAESSYSWV
DYEDYSQTDRYNLEQELLGVGLSPHPLHLAQKMASRPYQPISDLTVNTKATVLVQLESVR
IIRTKKGDQMAFLNVTDGINKLDVTLFPETYFYHKDKLSEGGLFYLDGRTQERDGRIQLI
LSNMEEASTERFWILLENHDKDLEVSQILAKYPGNIPVIIRYQGSKETIVSQRYKVAKNE
ELNQELAPYVLKTVLR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacaattggatacaaaatccgtctatagtttcatggatagtgtcgtagatttg
aacagctacgttgcgcgtgccaaagagcttggctatcaagcccttggtttgatggatcgt
gacaatctctatgctgcttatcattttgcccagcttgcaagtagaaacggtttacgtcct
ttgattggtatggaagctaatctattttacgagggaagaaaaattccttttcgtctatta
gcaaaaaataatcagggctataaaaatttgatgaagttggcaacagagctttcctcagga
caacgtgaacttacagctttttcggactatctgaatgctattgccctcatccttccgagt
gaagactgggagtcagggatgacacttggttcagaggttttcattggggtaaggccagaa
gatgcgggtaaagagtttgattatcctgtagttcccttacatacagtgcgttactttgag
aatgcagaccgctcgacgattcagatgttgcatgccatctcgcaaaacgtttccttgtca
gaggcctctatttgtcctatgaatcagcttcttttctcgcctcaagaaatggaaagtgct
tatagtgatatcccagaggctttgaacaatttggagcaacttgtttcagacattacttat
caatttgatacggatttgaagcttccccgttttaatcgagatatgccagcagttgaccaa
ttaagtcaattagctcaatctggattggagtctaaaaagttaacctcagcagtttatcag
gaacgtttagacaaagaattgtctatcattcatcagatgggctttgatgattatttcttg
attgtctgggacttgttacgctttgggcgtagccgtggttattatatgggaatgggacgt
ggatctgctgcaggaagcttggtggcctatgttcttgacattactggaattgatcccgtt
aaaaatgacttgcttttcgagcgtttcctaaatgaagagcgttatagcatgcctgatatt
gatatcgacttgcctgatacctatcgaagcgagtttcttcattatgttagggaccgttat
ggtagtaagcactctgctcagattgttaccttttcaacctttggagccaagcaggctatt
cgagatgtttttaaacgttttggtgctaaggaatttgaactgtcccaactaagtaaaaag
atttcttttcgtgataacttgacctctgtctatgagaagaatatgtcattcagacagttg
attaatcagagacaggaatttcagagggcttttgagattgctaaggctattgaaggccag
ccaagacagacctcaatccatgctgctggtatagtgatgagtgatgacgatctgaccaac
catattccactaaaagctggtgaggatatgatggttactcagtacgatgcctccgcggtt
gaggccaatggcttgcttaagatggatttcttgggcctccgtaatttgacttttgttcaa
aaaatgaaggagaagctagaagaagagcagggcatcactattgatatcaaatccattgac
ttggaagatccacagaccctagcactttttgccagtggtaagacaaagggaatttttcag
tttgagcaggcgggtgctataaacctcctcaaaaggattaaaccggttaagttcgaagaa
gtcgtagcgacaacctcacttaaccgtcctggagctagcgattatacagataatttcatt
gctcgtaagtatggtaaggaaaaagtagatctgattgatccagtagttgctccaatcctt
gagcctacttatggcatcatgctctatcaggagcaggttatgcagattgcccaagtattt
gcgggctttacactcggaaaagccgatttgcttcgtcgagcgatgtctaaaaaagatgcc
aatgaaatgtccaaaatgtctgaagagttcatggaaggaagtcgtcaattgggacgtgac
cctcagattgctgaaagactctttagtatgatggccaagtttgcgggttatggctttaat
agaagtcatgcctatgcctactcagctttggcctttcagctagcctatttcaaaacgcac
tacccacagatattctatgacgtcatgttaaattattcgtcaagtgattacattaaggat
gcaattgaaaatggcttctccctagctagcctcgatattaataggattccctatctggac
aagatttcaaatggaaagatcgtattaggtcttaagactatcaaaggcttgccaagagat
tttgccctttggattattgaagatcgcaaacaaaatggcaagtacatttctatagaagac
tttttgacacgtattcctagcaaatatcagaaagtcgatattttgacacctctcatccag
attggtttgtttgatatttttgaaccaaaccgtcagaaaatcattggcaatttaaacaac
ctctttacttttgtcaatgagttaggaagtttgtttgcagagtcctcttattcttgggtt
gattatgaagactatagccagacggatcgttataatttagaacaggagttactaggagtt
gggcttagtcctcatcctttacacctagctcaaaaaatggcctctcgtccctatcaacca
atttctgatttgacggttaatactaaggcgacggttttggttcagctagagtccgttcga
attatcagaactaaaaaaggtgatcagatggcctttctgaacgtaactgatgggatcaat
aaacttgatgttaccctattcccagaaacttatttctatcataaggataagttgagtgaa
ggtggtctcttctatcttgatggacggacccaggagcgtgatggacgcattcaattaatt
ttgtccaatatggaggaagctagtacggagcgtttctggattctacttgagaatcatgat
aaggacttagaagtttctcaaatcttagctaagtatcccggaaacattcctgtcattatt
cgttatcaaggaagtaaggaaactattgttagtcaaagatataaagtagctaagaacgag
gaacttaatcaggaattagcaccttatgtgttgaaaacggttttacgataa
DBGET
integrated database retrieval system
