Streptococcus salivarius HSISS4: HSISS4_00945
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Entry
HSISS4_00945 CDS
T04634
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssah
Streptococcus salivarius HSISS4
Brite
KEGG Orthology (KO) [BR:
ssah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssah03016
]
HSISS4_00945 (truB)
Enzymes [BR:
ssah01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HSISS4_00945 (truB)
Transfer RNA biogenesis [BR:
ssah03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HSISS4_00945 (truB)
Prokaryotic type
HSISS4_00945 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DUF4537
Motif
Other DBs
NCBI-ProteinID:
ALR79957
LinkDB
All DBs
Position
complement(1034587..1035495)
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AA seq
302 aa
AA seq
DB search
MIAFDIIRIMISGIINLKKEAGMTSHDAVFKLRKILQEKKIGHGGTLDPDVTGVLPIAVG
KATRVIEYMTEAGKVYEGEITIGFSTTTEDASGEVVQTTPIRELDEETVDKAMASFEGEI
TQIPPMYSAVKVNGKKLYEYARAGEEVERPQRQVTITEFVRTSPIELENDTARFSFRVAC
SKGTYVRTLSVDLGAKLGYASHMSALRRTASAGLTLDKALTLSQISEMVEAGDTSFLLPI
EFGVQDLPAVQVTEDDAKEISFGRFIAIDSQEPLVAAFLGDKVLAIMEKRNQVYKPRKVL
SQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgattgcttttgatataattagaattatgatttcaggaattattaatctaaaaaaagag
gctggtatgaccagtcatgatgctgtatttaagctacgtaaaatattacaagagaaaaaa
ataggacatggtggcactctcgatcctgatgtgaccggcgtattacctattgcagtcgga
aaagcgactcgtgtcattgaatacatgacagaagcaggaaaggtctatgaaggcgaaatt
accattggtttttcaacaacgaccgaggatgcaagtggtgaagtcgtccaaactactccg
ataagggagctagacgaagaaaccgttgacaaagcaatggctagttttgagggagaaatc
acacaaattccccctatgtactcagcagttaaggtcaacggaaagaaactttatgagtac
gcacgcgctggagaagaagtagaacgtccacaacgtcaagtgaccattaccgaatttgtc
cgtacctcacccatcgagctagaaaacgacactgcgagattcagcttccgtgttgcttgt
agcaagggaacttatgtccgtaccttatctgttgatttgggtgctaaactcggctacgcg
agtcatatgtctgctcttcgtcgaacagcctcagctggtttaaccttagataaggcacta
actctctcacaaatttcagaaatggtagaagcaggggatacatccttcctccttcccatc
gaatttggtgttcaggatctgccagcagtacaggtcactgaagatgatgctaaagaaatc
tcatttggtcgctttattgctattgatagccaagaacccttggttgcggcctttttagga
gacaaagttctagccatcatggaaaagcgaaatcaagtttataaacctagaaaagtatta
agtcaatga
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integrated database retrieval system
