Streptococcus salivarius HSISS4: HSISS4_01321
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Entry
HSISS4_01321 CDS
T04634
Symbol
sbcC
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ssah
Streptococcus salivarius HSISS4
Brite
KEGG Orthology (KO) [BR:
ssah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssah03400
]
HSISS4_01321 (sbcC)
DNA repair and recombination proteins [BR:
ssah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HSISS4_01321 (sbcC)
Archaeal homologous recombinant proteins
HSISS4_01321 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_23
SMC_N
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ALR80333
LinkDB
All DBs
Position
complement(1481258..1484437)
Genome browser
AA seq
1059 aa
AA seq
DB search
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSGDRN
VEEMRSTFASPEDDLTKVTFYFQQGKHLYRIERVLQQERAKRGGGTTMQKATASLVIVDK
IGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI
FGTGIFDRFQKSLEERLRQSNKDMDKRQAQLDGHFASQVWSEEELAVLTQTPASEKLARL
EELLVQRQDNLEEQKSILKDAHEDLAKLQKSLQTAQDLAKIFQELKQAKERYCLEIEEGA
QEQAEAKAHLDELQFAQGLQETISSLKQYQKQLLQLEQDLEIAQEELSEKQQAFEGVKAQ
KEALAAQSKDSLQKEEELETWKEDIIYAQSLVREQEKIKRSRTNYKQLEETYQQASKKIE
LLNQSLSELEANRLSVDSLHEAEKLLQSVGYSVDKQLAQDLKEIEGLNQELAKTEKRQQG
LSLDIDQAQESLKELEDQLATTLASRRQLMIAQLQAELEDGQPCMVCGSFDHPKVDGTQA
DEAALKELMDQVEALQAQKERQVATLSNRQATLSEVESKRQDLLDQVAKVKLTLEKHYLE
LQEQVKGQFDFDFAEDYEADCGQTLLRKVEQYYQELHKRFDKEEADCLHYQDELAKVQEK
SIDLAKAYQEAKAALDQAKERLKELQEAHQELESVEVYQERISLAKQELDLYNKQVKENS
EAYNQLHADIQGIRGQLESLTKSKENASQETKRLSAELNQSLMAEGALTNDLEQIQLWLL
EVNKQAIPELQAQLTSYQTLKQELQAQIVKGQELIEDQEKPDLGNLTQAVEDCQESYDKQ
LAQVSVMEQGLKDATATYQAAKTLQDSNQEAFKAHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLMDNRYSFVLSEEGRRARDHFGLDINVYDQLTGSERSVK
SLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGFGSLDKEALTKAIAVLEQIGE
NRVVGVISHVDDMKEGIAQQLAIIKSHDGSSSIKIVDKG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagtccagttagaattgaccaattttggaccttatcgtaaggaagtcatcaat
ttcacccagtttgaccacgctcccctctttttgattggtggagacacgggggctggtaag
agtaccctctttgatgccatgacggtggccttgtttgcgacgactagtggtgatcgtaat
gtcgaggagatgcggtcgacctttgctagtccagaggatgacttgaccaaggtgaccttt
tatttccaacaaggcaagcatctttatcgaattgagcgagtgctccagcaggagagagcc
aagcgaggtgggggcactactatgcaaaaagcgacggcttctctagtcattgtggataag
attggtggtcaggaaattgaaaaacttggggataagatcaaggaagttagtgaccagatt
gagcagattttgggactcaatgccgagcagttcaaacagattattctccttccgcaaaat
gatttcagccgtttcttgaaagaagattccaagaccaagacccaaattttgaagaaaatc
tttggaacgggtatttttgaccgttttcaaaagagcttggaagagcgtcttcgtcagagc
aataaggatatggataagcgccaagctcagctagatggccattttgccagtcaggtctgg
tctgaggaggaattagcagtcttgacccaaacgccagcttctgaaaaattggcacgtctt
gaagaacttttggtacaacggcaagataatcttgaagagcagaaaagcatcttgaaggat
gcccatgaggatttggctaagctgcagaagagcttgcaaactgcccaagatttggcaaag
attttccaagaattgaagcaagccaaggagcgttactgtctggaaattgaggaaggtgct
caggaacaggcagaagcgaaagcgcatctggacgaattgcagtttgcccaaggcttgcag
gaaaccattagcagtttgaagcagtatcagaagcagttattgcaattagagcaggatctt
gaaatcgctcaggaagaattgagtgaaaagcagcaggcttttgagggagttaaggctcaa
aaagaggcactcgcagctcaatctaaggactctcttcaaaaagaagaggagcttgaaact
tggaaagaggatattatctatgctcagagtcttgtccgagagcaggagaaaatcaaacgt
tcacgtactaactacaagcagttggaagaaacctatcaacaggcgtcgaaaaagattgag
ctcctcaaccagtccttgtcagaattggaagctaatcgtcttagtgtagatagcttgcat
gaggccgaaaaactcctccagtctgtgggctacagtgtggataagcaactggctcaggac
ctaaaagagatagagggcttgaatcaggagttggccaagacggaaaaacgtcaacaaggg
ttatctttggatattgaccaagctcaagaaagtctcaaggaattggaagaccagttagca
accactctagcctcacgacgtcagctcatgattgctcagttacaggcagaattagaagat
ggacagccctgtatggtctgtggttcgtttgaccatcctaaggtagatgggacacaagcg
gatgaagcagccttgaaggaactcatggatcaggtggaggcacttcaagctcaaaaagaa
aggcaagtggctaccttgtcaaatcgtcaggctaccttgagcgaggttgaatctaaacgt
caagatttgcttgaccaagtagctaaagttaagttaactcttgaaaaacactatctagaa
ctccaagagcaagttaagggacaatttgattttgattttgctgaggactatgaagcagac
tgtggacaaaccttactccgaaaggttgaacagtattatcaagagctacacaaacgcttt
gataaggaagaggcagattgtctccattatcaagatgagttagccaaggttcaggaaaaa
tcgatagatttggctaaagcctatcaagaagctaaggcggcgcttgaccaagctaaggaa
cgtcttaaggagttacaagaagctcatcaagagcttgaatctgttgaggtttatcaagaa
cgtatttccctagcaaagcaggagttggacctctacaataagcaagtcaaggaaaatagt
gaagcctacaaccaacttcatgccgacattcaaggaatcagggggcaacttgagagccta
accaagtctaaagaaaatgctagccaagaaactaagcgtttatcggctgaactaaaccaa
agtcttatggctgaaggggccctcaccaatgacctagagcaaatccagctttggcttctt
gaggtgaacaagcaagcgatccctgagctccaggctcaattgacaagctaccaaactctt
aaacaagagttgcaggcgcagattgtcaagggtcaagagcttatcgaagaccaagaaaag
ccggaccttggcaatctaacacaagcagtagaggattgtcaggagagctatgataagcaa
ctggctcaggtttctgtcatggagcaggggcttaaggatgcaacggctacctaccaagcg
gccaaaacccttcaagacagtaatcaagaggcctttaaagctcaccaagaactcagtgat
ctggttaaggtggtcaagggagaaaatacagcactaactggacgactcaatcttgaagtc
tatgttatccgtcagtatttccaacaaatcttggactatgccaatgccaactacatcggt
ctcttaatggataaccgctattcctttgttctgagtgaagaaggtcgtagggcgcgtgat
cactttggtttggacatcaacgtctatgaccagctgacaggtagcgagcgttccgtcaaa
tccttgtctggaggagaaacctttatcgctgcactggctattgccctatccctctcagag
gtggtgcaaaatactagcaagggtgctgttgttgaagctctcttcatcgacgaagggttt
ggctcactggataaggaagccctgaccaaagccatcgctgttctggaacaaatcggtgaa
aaccgtgtggtcggtgtcatcagtcacgtggacgacatgaaagaaggcatcgcccaacaa
ttagctatcatcaagtcgcatgatggcagtagcagtattaagattgtggataaggggtaa
DBGET
integrated database retrieval system
