Salinirubellus salinus: N0B31_07585
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Entry
N0B31_07585 CDS
T08478
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ssai
Salinirubellus salinus
Brite
KEGG Orthology (KO) [BR:
ssai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssai03016
]
N0B31_07585
Enzymes [BR:
ssai01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
N0B31_07585
Transfer RNA biogenesis [BR:
ssai03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
N0B31_07585
Prokaryotic type
tRNA splicing ligases
N0B31_07585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UWM56144
UniProt:
A0A9E7R5F3
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All DBs
Position
1362074..1363576
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AA seq
500 aa
AA seq
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MTDTFDAGEFTLRKVREHVWEIPQEGEMRVPARILASEALLEEISDDKTLQQLRNTTHLP
GIHRHALCMPDGHQGYGFPVGGVAGIDAENGCISPGAVGYDINCGVRMMKTDLTYDDVRG
HEEELVEALFEAVPSGLGGGGIVEGGNAVEEALERGVDWALEEGWAVESDLTHCEDEGRR
PDADPSAVSQKAKDRGRNQVGSLGSGNHFLEVQRVTDVFDGAIGDAYGLSEDQIVVLIHC
GSRGLGHQVCNDYLREIEKTHEGLLSQLPDRELAAAPAGSQLAEEYYGAMCACINFAWVN
RQLIMHRTREVFADVFDRPWEEMGMDLLYDVAHNIAKKEVHEVGVDAEGRPVADADAVDR
VERELYVHRKGATRAFPAGRPEVPEAYRDVGQPVIIPGSMGAGSYVLCGGTDSMDLTFGS
TAHGAGRLMSRTKAKQEYWGGDVQDDLRTQEVYVKAQSGATIAEEAPGVYKDVDEVVRVS
DELGIGSKVARTFPVCNIKG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccttcgacgcgggcgagttcacgctgcggaaggtccgcgaacacgtctgg
gagatcccacaggagggcgagatgcgcgtccccgcgcgcatcctcgccagcgaggcgttg
ctcgaggagatcagcgacgacaagacgctccagcagttgcgcaacaccacccacctcccc
ggcatccaccggcacgcgctctgcatgcccgacggccaccagggctacggcttcccggtc
ggcggcgtggcgggcatcgacgccgagaacggctgtatcagccccggagcggttggctac
gacatcaactgcggcgtcaggatgatgaagacggacctcacctacgacgacgtccggggc
cacgaggaggaactcgtcgaggcgctgttcgaggccgtcccctcggggctcggcggcggc
ggcatcgtggagggaggcaacgccgtcgaggaggcgctcgaacgcggcgtcgactgggca
ctggaggaggggtgggccgtcgagtccgacctcacccactgcgaggacgagggccgccgc
ccggatgccgacccgagtgccgtctcgcagaaggccaaggaccggggccgcaaccaggtc
gggtcgctcgggtccggcaaccacttcctcgaggtccagcgcgtgaccgacgtgttcgac
ggcgccatcggcgacgcctacggtctctccgaggaccagatcgtcgtcctcatccactgc
gggtcgcgtggcctcggccaccaggtgtgcaacgactacctccgggagatagagaagacc
cacgagggactgctctcgcagttgccggaccgcgagctcgcggcggcacccgccggctca
cagctggccgaggagtactacggcgcgatgtgtgcctgcatcaacttcgcgtgggtgaac
cgacagctcatcatgcaccggacccgggaggtgttcgcggacgtgttcgaccggccgtgg
gaggagatggggatggacctgctctacgacgtggcacacaacatcgccaagaaggaggtc
cacgaggtgggggtcgacgcggagggccggccggtggccgacgccgacgccgtcgaccgc
gtggaacgtgagctctacgtccaccgcaagggagccacccgggcgttccccgcgggccgg
ccggaggtgccggaggcctaccgggacgtcggccagccggtcatcatccccggctcgatg
ggggccgggtcgtacgtcctctgtggcggcaccgactcgatggacctcacgttcgggtcg
acggcccacggcgccggtcggctgatgtcgcgcacgaaggcgaagcaggagtactggggc
ggcgacgtgcaggacgacctgcgcacgcaggaggtgtacgtcaaggcccagtccggcgcg
accatcgccgaggaggcgccgggcgtctacaaggacgtcgacgaggtggtccgggtgagc
gacgaactcggcatcggctcgaaggtggcccggacgttccccgtctgcaacatcaagggg
tga
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