Salinirubellus salinus: N0B31_08965
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Entry
N0B31_08965 CDS
T08478
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ssai
Salinirubellus salinus
Pathway
ssai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
N0B31_08965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssai03019
]
N0B31_08965
03009 Ribosome biogenesis [BR:
ssai03009
]
N0B31_08965
04131 Membrane trafficking [BR:
ssai04131
]
N0B31_08965
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssai04147
]
N0B31_08965
Messenger RNA biogenesis [BR:
ssai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
N0B31_08965
Ribosome biogenesis [BR:
ssai03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
N0B31_08965
Membrane trafficking [BR:
ssai04131
]
SNARE
SNARE associated proteins
Others
N0B31_08965
Autophagy
Aggrephagy
Other aggrephagy associated proteins
N0B31_08965
Exosome [BR:
ssai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
N0B31_08965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
RuvB_N
AAA_2
TIP49
AAA_22
AAA_14
AAA_5
NPHP3_N
AAA_33
nSTAND3
RNA_helicase
AAA_7
Mg_chelatase
AAA_28
IstB_IS21
DUF815
AAA_lid_PRS2_C
AAA_25
AAA_18
AAA_3
ATPase
ABC_tran
AAA_17
Parvo_NS1
Sigma54_activat
TsaE
NACHT
AAA_11
AAA_24
AAA_30
NB-ARC
AAA_19
bpMoxR
PhoH
Sigma54_activ_2
SLFN-g3_helicase
Zeta_toxin
NTPase_1
Bac_DnaA
ATP-synt_ab
Vps4_C
Zot
Motif
Other DBs
NCBI-ProteinID:
UWM56409
UniProt:
A0A9E7R743
LinkDB
All DBs
Position
complement(1619231..1621498)
Genome browser
AA seq
755 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRAAMREMELENGDYIVIDGRSGGRAVARVWPGYPEDEGA
GVVRVDGRLRQEANVGIDDKVEVEAADVKPAKSITVALPQNLRIRGNVGPHIRDKLSGQA
VTKGQQVPFSLGLGPLSSMSGQQIPLKIANTNPQGTVVVTDGTEVEVSEKPAEQITGGRP
ATGEGPSVAYEDIGGLDDELDKVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTL
MAKAVANEIDAYFTDISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIAPKR
GETSGDVERRVVAQLLSLMDGMDERSDVVVIGATNRLDALDPALRRGGRFDREIEIGVPD
ADGRLEILQVHTRGMPLADDVNLQQYAESTHGFVGADLESLAKEGAMNSLRRIRPQLDLE
QDQIDADVLESMTVTETDFKEALKGITPSALREVFVEVPDVTWEQVGGLESTKERLRETI
QWPLEYPEVFEQLDMAAARGVLLYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVG
ESEKGVREVFEKARANAPTVIFFDEIDSIAGERGQRMGDSGVGERVVSQLLTELDGLEEL
EDVVVIATTNRPDLIDAALLRPGRLDRHVHVPVPDEDARRAILEVHTREKPLADDIDLDD
LATDMEGYVGADIEAVCREAAMNASRELITSVDPEDIGSSVGNVRITREHFEQALEEVNP
SVTDETRQRYEEIERRFEQHESETYDDRDVSRTFQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccgtcaaacccctgaaacagaaagacgccggccgtggactggccgcgata
gaccgcgccgcgatgcgcgagatggaactggagaacggtgactacatcgtcatcgacggg
cgcagcggaggccgtgcggtggcccgcgtctggcccggctaccccgaggacgagggcgcg
ggcgtcgtccgcgtcgacggtcggctccgacaggaggccaacgtcggcatcgacgacaag
gtggaggtcgaggccgccgacgtcaagcccgcgaagtccatcaccgtcgcgctcccgcag
aacctccgcatccgcgggaacgtcggtccccacatccgtgacaaactgagcgggcaggcc
gtcacgaagggccagcaggtgccgttctcgctcggtctcggcccgctctcctcgatgagt
ggccagcagattccgctcaagatagccaacaccaacccgcagggcaccgtcgtcgtcacc
gacgggacggaggtcgaggtcagcgagaagcccgccgagcagatcacgggtggccgtccg
gccactggcgagggaccgtccgtcgcctacgaggacatcggtgggctggacgacgaactc
gacaaggtccgggagatgatcgaactcccgatgcgccaccccgaactgttccagcagctc
ggcatcgagccgccgaagggggtgctcctgcacggcccgccgggcaccgggaagaccctg
atggcgaaggccgtcgccaacgagatagacgcgtacttcacggacatctccggcccggag
atcatgtcgaagtactacggcgagagcgaggaacagctccgcgaggtgttcgaggaggcc
gaggagaacgccccggccatcgtcttcatcgacgagatcgactccatcgccccgaaacgt
ggcgagacgagcggtgacgtcgaacgccgcgtcgtcgcccagttgctctcgctgatggac
ggcatggacgagcgcagcgacgtggtcgtcatcggcgcgacgaaccgcctcgacgcgctc
gaccccgcgctgcgacgtggtggccgcttcgaccgcgagatagagatcggcgtcccggac
gccgacggccgcctcgagatcctccaggtccacacccgcgggatgccgctggccgacgac
gtgaacctccagcagtacgccgagtccacccacgggttcgtgggtgcggacctcgagtcg
ctggcgaaggagggcgcgatgaactcgctgcggcgcatccgcccgcagctcgacctcgaa
caggaccagatcgacgccgacgtactcgagtcgatgaccgtcaccgagacagacttcaag
gaggcgctgaagggcatcacgccctcggcgctccgcgaggtgttcgtcgaggtgccggac
gtcacctgggagcaggtcggcggcctcgaatcgaccaaggagcggctccgcgagaccatc
cagtggccgctcgagtaccccgaagtgttcgagcaactggacatggccgccgcacgcggc
gtcctgctctacggcccgccgggcaccgggaagaccctgctcgcgaaggccgtcgccaac
gaggcccagtcgaacttcatctccatcaaggggcccgaactgctgaacaagtacgtcggt
gagtccgagaagggcgtccgtgaggtgttcgagaaggcccgtgccaacgcgcctaccgtc
atcttcttcgacgagatcgactccatcgcgggcgagcgcggccagcgcatgggcgactcg
ggcgtcggcgagcgcgtcgtctcacagctcctgacggaactcgacggcctggaggagctg
gaggacgtcgtcgtcatcgccacgacgaaccgcccggacctcatcgacgccgcactcctg
cgaccgggccggctggaccgtcacgtccacgtccccgtcccggacgaggacgcccggcgt
gccatcctcgaggtccacacccgcgagaagccgctggccgacgacatcgacctcgacgac
ctcgccaccgacatggagggctacgtcggcgccgacatcgaggccgtctgccgcgaggcc
gcgatgaacgcctcgcgcgaactcatcacgagcgtcgaccccgaggacatcggttccagc
gtcggcaacgtccgcatcacgcgggagcacttcgagcaggcactggaggaggtcaacccc
tccgtgaccgacgagacccgccagcgctacgaggagatcgagcgccggttcgaacagcac
gagagcgagacctacgacgaccgggacgtgtcccggacgttccagtag
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