Salinirubellus salinus: N0B31_13265
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Entry
N0B31_13265 CDS
T08478
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ssai
Salinirubellus salinus
Brite
KEGG Orthology (KO) [BR:
ssai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssai03016
]
N0B31_13265 (thpR)
Enzymes [BR:
ssai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
N0B31_13265 (thpR)
Transfer RNA biogenesis [BR:
ssai03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
N0B31_13265 (thpR)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
UWM53112
UniProt:
A0A9E7QZZ7
LinkDB
All DBs
Position
complement(2482166..2482726)
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AA seq
186 aa
AA seq
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MRLFVSVPLHALAEEVAAAQDPLDLPGLKLTDPTQAHVTLKFLGEVDESALDDLTDAIGR
AVESADVAPFDAEVGGYGVFPSLGYISVVWTGFRSGTEQLTRLHEAIERETVALGFEPED
HSFTPHATLARMGDARSKDAVREVVEADDPDVGTFHVDAVELTESTLTDGGPRYSTVERF
GLPTGV
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttcgtgagcgtcccgctccacgccctcgccgaggaggtcgcggccgcacag
gacccgctggacctgccggggctgaagttgaccgacccgacacaggcccacgtcaccctg
aagttcctcggggaggtggacgagtccgcgctcgacgacctgaccgacgccatcgggcga
gcggtcgaatcggccgacgtggcgccgttcgacgccgaggtgggcggctacggcgtgttc
ccgtcgctcggctacatcagcgtcgtctggacggggttccggtcggggaccgaacagctg
acccgtctgcacgaggcgatcgaacgcgagacggtggcgctcgggttcgagccggaggac
cactcgttcacgccccacgccacgctggcccgcatgggagacgcccggtcgaaggacgcg
gtgcgcgaggtggtcgaggccgacgacccggacgtgggcacgttccacgtcgacgcggtg
gagttgaccgagagcacgctcaccgacggcgggccgcgctactcgacggtcgaacggttc
ggcctgccgacaggggtttag
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