Salinirubellus salinus: N0B31_19035
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Entry
N0B31_19035 CDS
T08478
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
ssai
Salinirubellus salinus
Pathway
ssai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N0B31_19035 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssai03021
]
N0B31_19035 (rpoB)
Enzymes [BR:
ssai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N0B31_19035 (rpoB)
Transcription machinery [BR:
ssai03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
N0B31_19035 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zn_ribbon_NOB1
DUF5817
DUF7575
Motif
Other DBs
NCBI-ProteinID:
UWM54198
UniProt:
A0A9E7UAF3
LinkDB
All DBs
Position
3613346..3615178
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AA seq
610 aa
AA seq
DB search
MSQGRQREAKIYVNGSLVGTHPDPHELAENIRTARRRGEVSQMVNVSVKDRTNEVIVNAD
AGRARRPLLVIEGGEPLISEEEIQAVSEGDLEFEDLVDRGYIEFIDAEEEEDILVAVDDD
DLTERHTHMEVDPQLMFGIGAGMIPYPEHNASPRITMGSGMIKQSLGLPSANYRIRPDTR
QHLLHYPQLSMVKTQTTEQIGYDDRPAAQNFVVAVMSYEGFNIEDALVLNGGSIDRALAR
SHFFRTYEGEERRYPGGQEDRFEMPSDDVRGARGEDAYAHLDEDGLVNPETRVGENDVLL
GKTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLSKVSVRDE
RIPELGDKFASRHGQKGVVGHIAPQEDMPFTENGVVPDLIVNPHALPSRMTVGHVLEMLG
GKVGSLEGRRVDGTAFTGEDEAELRDALTEHGFKDSGKEVMYSGVTGEKIEAEIFVGVIF
YQKLYHMVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERL
LDESDREQIHVCGQCGMTAVENVEQRRVYCPNCGEETDVHQVEMSYAFKLLLDEMKALGI
APRIELKDAV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagggacgacaacgagaagccaagatctacgtgaacggttcgctggtcggcacc
caccccgacccgcacgagctcgccgagaacatccggacggcccgccgacgcggcgaggtc
agtcagatggtcaacgtctcggtgaaagaccggacgaacgaggtcatcgtcaacgccgac
gccggccgggcgcgccgcccgctgctggtcatcgagggcggtgagccgctcatctccgag
gaggagatacaggcggtcagcgagggggacctcgagttcgaggacctcgtcgaccgcggc
tacatcgagttcatcgacgccgaggaggaagaggacatcctcgtcgccgtcgacgacgac
gacctcacggagcgccacacgcacatggaggtcgacccgcagctgatgttcggtatcggc
gcggggatgattccctacccggagcacaacgccagcccgcgcatcacgatggggtcgggg
atgatcaagcagtcgctggggctcccctcggcgaactaccgcatccggcccgacacgcgc
cagcacctgctgcactacccgcagctctcgatggtcaagacccagaccaccgagcagatc
ggctacgacgaccgcccggcggcccagaacttcgtcgtcgcggtcatgagctacgagggg
ttcaacatcgaggacgcgctcgtgctcaacggcggctccatcgaccgggcactcgcccgc
tcgcacttcttccgcacgtacgagggcgaggaacggcgctaccccggtgggcaggaggac
cgcttcgagatgccgagcgacgacgtgcgcggtgctcgcggcgaggacgcctacgcacac
ctcgacgaggacggcctcgtcaaccccgagacgcgcgtcggcgagaacgacgtgctcctc
gggaagacgtcgccgccgcggttcctcgaggaaccggacgacatgggcggcctctccccg
cagaagcgccgcgagacgagcgtgacgatgcgctcgggcgagagcggtgtcgtcgacacc
gtgacgctgatggagggtgaggacggctcgaagctctcgaaggtctccgtgcgcgacgag
cgcatccccgaactcggggacaagttcgcgtcgcgccacggccagaagggtgtcgtcggc
cacatcgcgccgcaggaggacatgccgttcacggagaacggcgtcgtcccggacctcatc
gtcaacccgcacgcgctgccgtcgcggatgacggtgggccacgtcctcgagatgctcggc
ggcaaggtcggctcgctggagggtcgccgcgtcgacgggaccgccttcaccggcgaggac
gaggcggagctccgcgacgccctgaccgaacacgggttcaaggactcgggcaaggaggtc
atgtactccggggtgaccggggagaagatcgaggccgagatcttcgtcggcgtcatcttc
taccagaagctctaccacatggtctcgaacaagatccacgcccgctcgcgtgggccggtg
caggtgctcacgcgccagccgacggaggggcgcgcccgcgagggtggcctccgtgtcggt
gagatggagcgtgacgtgctcatcgggcacggcgccgcgatggcgctgaaggaacgactg
ctcgacgagtccgaccgcgagcagatccacgtctgcggccagtgcgggatgacggccgtc
gagaacgtggaacagcgacgtgtctactgccccaactgcggggaggagacggacgtccac
caggtggagatgagctacgcgttcaagctcctgctggacgagatgaaggcgctcggcatc
gccccgcgcatcgaactgaaggacgcagtgtaa
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