Seohaeicola saemankumensis: ABWH93_08755
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Entry
ABWH93_08755 CDS
T11822
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssak Seohaeicola saemankumensis
Pathway
ssak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABWH93_08755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssak03021
]
ABWH93_08755
03400 DNA repair and recombination proteins [BR:
ssak03400
]
ABWH93_08755
Enzymes [BR:
ssak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABWH93_08755
Transcription machinery [BR:
ssak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABWH93_08755
DNA repair and recombination proteins [BR:
ssak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABWH93_08755
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
XHC04389
LinkDB
All DBs
Position
complement(1761527..1762543)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLEVKPGNDPARQATVIAEPLERGFGLTLGNALRRILMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSIRMEVEGPKRLTVNAKGPGVVTAGDISD
SAGIEILNKDHVICHLDDGADLYMELTVNTGKGYVSADKNKPEDAPIGLIPIDAIYSPIK
RVSYEVTPTREGQVLDYDKLTMKIETDGSLTPDDAVAYAARILQDQLSIFVNFDEPESAT
RSDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDAF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactgggccgaactgatcaagccgacacagcttgaagtcaagccgggc
aacgatccggcccgtcaggcgaccgtgatcgccgaaccgctggagcggggctttggcctg
acgctgggaaacgcgctacgccgcatcctgatgtcgtcgctgcagggcgcggccatcacc
tccgtgcagatcgacaacgtgctgcacgagttttcctcggtcgccggtgtgcgcgaggat
gtgaccgacatcatcctgaacctcaagggtgtctcgatccgcatggaagtggaagggccc
aagcgcctgaccgtgaatgcaaagggtccgggcgttgtcaccgccggtgacatttcggac
agcgcaggcatcgagatcctgaacaaggatcacgtgatctgccacctggacgatggcgca
gacctttacatggaactgacggtcaacaccggcaagggctacgtctcggccgacaagaac
aagccggaagatgcgcccatcggtctgatcccgatcgacgcgatctattcgccgatcaag
cgcgtgtcctacgaagtgaccccgacccgcgaaggtcaggttctggactacgacaagctg
accatgaagatcgaaaccgatggttcgctgaccccggatgatgccgtggcctatgctgcg
cgtatccttcaggatcagctgtcgatcttcgtcaacttcgacgagcccgaaagcgccacc
cgttcggatgatgatgacggtctggagttcaacccgcttctgctgaagaaggtggacgag
ctggaactgtcggtgcgttcggcaaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaaaaccgaagccgagatgctgcgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctgtccggcatgggcctgcaccttggcatggatgtcgag
gactggccgccagacaacatcgaagatctggccaagaaattcgaagacgcgttctga
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