Seohaeicola saemankumensis: ABWH93_09625
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Entry
ABWH93_09625 CDS
T11822
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ssak Seohaeicola saemankumensis
Pathway
ssak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABWH93_09625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssak03400
]
ABWH93_09625
Enzymes [BR:
ssak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ABWH93_09625
DNA repair and recombination proteins [BR:
ssak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ABWH93_09625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
XHC04553
LinkDB
All DBs
Position
complement(1941200..1941988)
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AA seq
262 aa
AA seq
DB search
MTFTLATWNINSVRLREGLVCKLLSEEAPDVLCLQECKSPVDKIPLEGFQALGYHHMVAR
GQKGYNGVAILSKLPLEDMGEMDFASLGHARHVAARLPNGVVIHNCYVPAGGDVPDRTVN
DKFGQKLDYLTEMRDWFHGDRPERSILVGDLNIAPREDDVWNHKQLLKIVSHTPVEVDHL
GQVQESGAWVDVTRADIPEGQLYSWWSYRAADWDAADKGRRLDHVWATKDIAQAGHSSRV
LRAARGWEQPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacctttacccttgccacctggaacatcaactcggtcaggctgcgcgaagggcttgtg
tgcaagcttctgtccgaggaagcccccgatgtgctgtgcctgcaggaatgcaaaagcccg
gtggacaagatcccgctggaggggttccaggcgctgggttaccaccacatggtcgcacgt
gggcaaaagggctataacggggtggcgatcctgtccaagctgccgctcgaggatatgggc
gagatggatttcgccagccttggccatgcgcgtcatgtggcggcgcggctgcccaatggc
gtggtgatccacaactgctatgttcccgcaggcggcgatgtgccggatcgcacggtgaac
gacaagttcggccagaagctggattacctgaccgagatgcgcgactggttccatggcgac
cggcccgaacggtcgatccttgtcggcgatctgaacatcgccccgcgcgaagatgacgtg
tggaaccacaagcagcttctcaagattgtcagccacacgcccgtcgaggtggaccacctg
ggacaggtgcaggagtccggcgcctgggtcgatgtgacccgtgccgacatacccgagggg
cagctttacagctggtggtcctatcgcgcggccgattgggatgccgccgacaaggggcgc
cggctggatcatgtctgggccacgaaggatatcgcacaggcaggacactccagccgcgtg
ttgcgcgcggcgcgcggctgggagcagcccagcgatcacgcgcctgtctttgcaaccttt
gacctttga
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