Seohaeicola saemankumensis: ABWH93_10755
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Entry
ABWH93_10755 CDS
T11822
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ssak Seohaeicola saemankumensis
Pathway
ssak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABWH93_10755 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssak03021
]
ABWH93_10755 (rho)
03019 Messenger RNA biogenesis [BR:
ssak03019
]
ABWH93_10755 (rho)
Transcription machinery [BR:
ssak03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ABWH93_10755 (rho)
Messenger RNA biogenesis [BR:
ssak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABWH93_10755 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
S1CSD-TOTE-2
AAA_22
AAA_25
AAA
OB_RNB
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
XHC00858
LinkDB
All DBs
Position
complement(2181757..2183046)
Genome browser
AA seq
429 aa
AA seq
DB search
MNDDVTQTIERLNLSDLKAKSPKDLLAMAEDLEIENASTMRKGDMMFAILKEMAEEGWEI
GGDGVLEVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRQYALRTGNSIEGVMKAPEENER
YFALTNVNSINFEDPEKARHKIAFENLTPLYPDERLKMEIEDPTIKDRSARIIDLVAPIG
KGQRSLIVAPPRTGKTVLLQNIAHSIERNHPECYLIVLLIDERPEEVTDMQRSVKGEVIS
STFDEPATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGV
DANALQRPKRFFGAARNVEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSEIVLDRKV
ADKRVFPAMDILKSGTRKEDLLVDAKDLHKTFVLRRILNPMGTTDAIEFLISKLKQTKTN
GEFFNSMNS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgatgtcacccaaaccatcgaacgcctgaacctgtctgatctgaaggcaaaa
agccccaaggatcttctggcgatggccgaggatctcgagatcgagaacgcatcgaccatg
cgcaagggcgacatgatgttcgccatcctcaaggagatggccgaagaaggctgggagatt
ggcggcgacggcgttctggaagtgcttcaggatggtttcggtttcctgcgctcgcccgag
gccaattatcttcctggccccgatgatatctatgtttcgcccgacatgatccgccaatac
gccctgcgcaccggcaactcgatcgagggcgtcatgaaggcacccgaggaaaacgagcgc
tacttcgcgttgaccaacgtgaactcgatcaatttcgaggatcccgaaaaggcgcgtcac
aagatcgctttcgaaaacctgacgccgctttacccggatgagcgcctgaagatggagatc
gaggatccgacgatcaaggaccggtcggcacggatcatcgatctggtcgcgcctatcgga
aaagggcagcgttccctcatcgtggcgccgccgcgcacgggtaagacggtgcttctgcag
aacatcgcgcattcgatcgaacgcaaccatcctgaatgctatctgatcgttctgttgatt
gacgaacggccggaagaggtgacggacatgcagcgttcggtcaagggcgaggtgatctcg
tcgacctttgacgaaccggcaacccgacatgtggccgtgtctgaaatggtgatcgaaaaa
gccaaacgactggtcgagcataagcgcgacgtcgtcatcctgctggacagcatcacgcgc
ctgggccgggcgttcaacaccgtggttccgtcctctggcaaggtcctgacgggtggtgtc
gacgcgaacgccctgcagcgccccaagcggttctttggtgccgcgcgtaacgttgaagag
ggtggatcgctgacgatcatcgcaacggcgctggtcgatacgggcagccgcatggacgag
gtgatcttcgaagaattcaagggcaccggcaactcggagatcgtgctggaccggaaggtt
gccgacaagcgcgtgttcccggccatggatatcctcaagtccggcacccggaaagaggat
ctgctggttgatgcgaaggatcttcacaagacctttgtccttcgcaggatcctcaacccg
atgggtacaacagacgcaatcgaattcctgatttcgaagctgaaacagacgaagacaaac
ggcgagttcttcaattccatgaactcgtaa
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