Spiribacter salinus: SPISAL_02865
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Entry
SPISAL_02865 CDS
T02685
Name
(GenBank) HU, DNA-binding transcriptional regulator subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
ssal
Spiribacter salinus
Brite
KEGG Orthology (KO) [BR:
ssal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssal03032
]
SPISAL_02865
03036 Chromosome and associated proteins [BR:
ssal03036
]
SPISAL_02865
03400 DNA repair and recombination proteins [BR:
ssal03400
]
SPISAL_02865
DNA replication proteins [BR:
ssal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SPISAL_02865
Chromosome and associated proteins [BR:
ssal03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SPISAL_02865
DNA repair and recombination proteins [BR:
ssal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SPISAL_02865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
GTP_EFTU_D2
DUF937
HU-DNA_bdg
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AGM40667
UniProt:
R4VJB5
LinkDB
All DBs
Position
581711..581983
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AA seq
90 aa
AA seq
DB search
MNKSELIDAVADSAGLSKADATKAVDAFASTVSGALKKGDQVTLVGFGTFTVRERAARTG
RNPRTGASINIPASKVPGFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatccgaactcatcgacgcagtggccgattcggctggtctttccaaagccgac
gccacgaaagcagttgacgcttttgcctccacggtttctggcgcactgaaaaagggcgat
caggtcacgctggttggttttggcaccttcactgtgcgcgagcgcgccgctcgcaccggc
cgcaacccgcgcaccggcgcttccatcaacattcccgcgtccaaagtgcctggcttcaag
gctggcaaggcgcttaaggatgccgtaaactaa
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