Spiribacter salinus: SPISAL_03930
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Entry
SPISAL_03930 CDS
T02685
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ssal
Spiribacter salinus
Brite
KEGG Orthology (KO) [BR:
ssal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssal03009
]
SPISAL_03930
Enzymes [BR:
ssal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SPISAL_03930
Ribosome biogenesis [BR:
ssal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SPISAL_03930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
PCMT
Cons_hypoth95
MTS
Methyltransf_11
Met_10
RrnaAD
Methyltransf_15
Methyltr_RsmB-F
Methyltransf_23
Methyltrans_SAM
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AGM40880
UniProt:
R4V787
LinkDB
All DBs
Position
802219..803529
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AA seq
436 aa
AA seq
DB search
MPAEPVSLTVERISHEGRGIAHHDGRTAFIQGALPGETVSAVIKRRRRRQEEGQAVEITS
HPAASRVEPPCPHFGICGGCSLQHMDPGAQIAHKQAALAELLANTGGVTPAEWLAALTGP
TQGYRRRARLGVKYVPRKDDRVLVGFRERFSPHVADIDSCHILDERVGRVLDELAGLVRG
LSIPDRIAQIEVAAGDEAVALVFRNLRELSPDDRAALIAFGDRHGFLIFEQPGNESTVAP
VGHAHTRVHYALPDYGLRFAFAPTDFTQVNADINRQMVPLALELLEITPDARVLDLFCGL
GNFTLPIAREAQAVIGLEGAEPLVERGRENAAANGLENVRFEAADLTTMTPDAAFLGGPI
DRVLLDPPRSGALEVLPAIARLAPERIVYVSCGPATLARDVGELVHQHGYRLDKAGLMDM
FPHTGHAEAIALLTRT
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
ttgccggccgagccggtgtcactgactgttgagcggatcagccatgaggggcgaggcatt
gcgcatcacgatggccgaacggcctttattcagggtgccctgccaggagaaacggtctct
gcggtgatcaagcgtcggcgtcgccggcaggaagaggggcaggccgtagagatcactagc
catccagctgccagtcgggttgagccaccgtgcccgcattttgggatctgcggtggctgc
agtctccagcacatggatcccggcgcccagattgcccataagcaagccgcgctggccgaa
ttgctggccaatacgggcggtgttaccccggctgagtggcttgcagcactcactgggccg
acgcagggctatcggcgacgggcccggcttggcgtgaaatacgtgccgcgaaaagatgac
cgggttctggtcggttttcgtgagcgtttcagcccccatgtggccgatatcgatagctgc
catatcctggatgagcgcgtgggccgagtcctcgatgagctggctggcctggtgcggggt
ttatccatccccgaccggatcgcacaaatcgaggtggcggcgggcgatgaggctgtggcc
cttgtctttcgcaacctgcgtgaactcagcccggacgatcgcgccgcgttgatcgcgttc
ggtgaccgccatggctttttgatttttgagcagccaggcaacgagtcgacggtggccccg
gttggccacgcgcacacgcgggtccattacgcgctgccggattacgggctgaggttcgct
tttgccccgactgacttcacccaagttaatgccgatatcaatcggcagatggtgccgcta
gcacttgagctgctagagatcacgcccgacgcccgggtgctggatctgttctgtgggctc
ggtaattttaccctgcccattgcccgtgaggcgcaggccgtcattggtctggaaggggct
gagccgctcgtcgagcggggccgagagaatgccgcggccaatgggctcgagaatgtgcgc
tttgaggccgctgatctgacaacgatgacgcccgatgccgccttcctgggcggtccgatt
gatcgggttttgctggatccgccgcgctccggcgcgctggaggttctccccgcgatcgcc
agactggctccggagcgcatcgtctatgtctcctgtggcccggcaacgctggcccgtgat
gtgggggagctcgtccatcagcacgggtatcgtctggacaaggcggggctgatggatatg
ttcccgcacaccgggcatgcggaggcgattgctttgttgacccgcacttag
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