Spiribacter salinus: SPISAL_04380
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Entry
SPISAL_04380 CDS
T02685
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ssal
Spiribacter salinus
Brite
KEGG Orthology (KO) [BR:
ssal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssal03016
]
SPISAL_04380
Enzymes [BR:
ssal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SPISAL_04380
Transfer RNA biogenesis [BR:
ssal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPISAL_04380
Prokaryotic type
SPISAL_04380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGM40970
UniProt:
R4V7I4
LinkDB
All DBs
Position
complement(892498..893571)
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AA seq
357 aa
AA seq
DB search
MSEPTAGLTGPISPITPVNAWGAPLGQARVAASPADFQVTEVLGYRADGEGPHLLVEIEK
CGLSTADAMQQLARAWDCPRREMGYAGRKDRQAVTRQWLSVPWPVNAALPETGPIGEGLV
VLSVERHRRKLRIGALQGNRFRLTLREASLDPRAVSSRLARVARCGVPNYFGPQRFGRGG
RNLSAAVDWLTGGRRPRGRSDRSMQLSALRSEVFNRVLAARVLDGSWNQAIADDLMVLDG
RGSLFPASEEPADSLARRMAGLHVHATGPLPGRRADALRLPAALADWEDKQTPCLAAAVD
GLTAQGLDAARRALRLSVGELAWAWPAPQTLVITCRLPRGAYATTVLRELVTWSAPE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagccgacggctggcctgacggggcccattagcccgataacgccggtaaacgcc
tggggcgcaccgctgggacaggcccgggtggcggcctctcccgcagattttcaggtgacc
gaggtgcttggctatcgtgcggatggcgaaggcccgcatctgctcgttgagatcgaaaag
tgcggcttgagtaccgcggacgcgatgcagcagcttgcgcgcgcgtgggactgcccgcgg
cgtgagatgggttacgccggtcgtaaagatcgacaggccgtgacgcggcaatggctcagt
gtgccctggccagtgaatgccgcattaccggagaccgggccaatcggtgagggtctggtg
gtgttgagcgttgagcgccaccgccgcaagctgcgaatcggtgccttgcagggcaatcgc
tttcggctgacgctgcgcgaggcgagcctggacccgagagcggtgagtagccggcttgcc
agggtggcgcgctgtggtgtccccaattactttggcccgcagcggttcggacgcggcggt
cgcaacctctcggccgcggttgactggttaaccgggggtaggcgcccccggggtcggagt
gatcgcagcatgcagctctcggcgctgcgtagcgaggtctttaatcgggtgctagcggcg
cgcgtgctcgatggcagctggaatcaagccatagcggacgacctgatggtcctcgatggg
cgcggcagtctgttcccggcaagtgaggagcctgcggactcactggcgcggcgtatggcc
ggcttgcacgttcacgccacgggcccgttgcctggccgtcgggcggatgccctgcggttg
ccggcggcgctggccgactgggaagacaaacaaacgccttgcctggcagcggctgtggac
ggcctgaccgcccaggggcttgatgccgcccgacgtgcgcttcggctgagtgttggggag
ctcgcctgggcctggcctgcgccacaaacgctggtgatcacctgcaggttgccgcgtggg
gcctatgccaccaccgtgttacgggagctggtgacctggtcagcgcctgagtag
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