Spiribacter salinus: SPISAL_05480
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Entry
SPISAL_05480 CDS
T02685
Name
(GenBank) DNA repair protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ssal
Spiribacter salinus
Pathway
ssal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPISAL_05480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssal03400
]
SPISAL_05480
DNA repair and recombination proteins [BR:
ssal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPISAL_05480
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SPISAL_05480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AGM41190
UniProt:
R4V882
LinkDB
All DBs
Position
complement(1117382..1118137)
Genome browser
AA seq
251 aa
AA seq
DB search
MAEASGEAALEPAFVLHSRAYRNTSLLLELLTRGHGRIGLVARGARGPRSRTAGLLQPFQ
PLAASWRARGELGNLRQVEGAGRPLRLIGRRLVSGFYANELLLRLLGRDDPHPGLFECYV
GFLEALTAEADEAVALRTFERDLLALLGYGLALERDTDNHRLAPDQWYRYDPTRGAMAVG
GPQAGGLVLSGRLLLALGEDPISAETARQSRDLMRAALRPHIGDRPLKSRELYARYPATG
GHENGASSGQS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccagtggtgaggcggccctggagccggcatttgtgctacacagccgggcc
taccgcaataccagcttgttgctcgagttactcacgcggggtcatggccgcattggcctg
gtggcccgtggggcccgcgggccgcgatcgcgaacggctgggctgctgcagcctttccag
ccgttagcggcgagctggcgtgcccggggcgagcttggcaacctgcgacaggtcgaaggg
gccgggcggccactgcggctgatcgggcggcgtctggtgagcgggttttatgccaatgag
ctactgctgcggttgctgggccgtgacgacccgcatccaggtctgttcgagtgctatgtc
ggttttcttgaagcgctgacggctgaggccgatgaagccgtcgccctgcggactttcgag
cgcgatctgttggccctgctcgggtacggcctggcactggagcgagataccgacaatcac
cgtctggcaccggatcagtggtaccggtacgatccgacgcgaggcgcgatggcggtgggt
ggtccgcaggccggggggctcgtgctctcaggccggctgctgctagcgcttggtgaagac
cccatcagtgccgagacggcgcggcagagccgcgatctgatgcgcgccgccctgcgaccg
catattggtgaccggccactgaaaagccgcgaactgtatgcccgataccctgcaaccgga
ggtcacgagaatggcgcatcatcagggcagtcttga
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integrated database retrieval system
