Spiribacter salinus: SPISAL_05540
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Entry
SPISAL_05540 CDS
T02685
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ssal
Spiribacter salinus
Pathway
ssal00020
Citrate cycle (TCA cycle)
ssal00190
Oxidative phosphorylation
ssal00650
Butanoate metabolism
ssal00720
Other carbon fixation pathways
ssal01100
Metabolic pathways
ssal01110
Biosynthesis of secondary metabolites
ssal01120
Microbial metabolism in diverse environments
ssal01200
Carbon metabolism
Module
ssal_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssal_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ssal_M00149
Succinate dehydrogenase, prokaryotes
ssal_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ssal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPISAL_05540 (sdhA)
00650 Butanoate metabolism
SPISAL_05540 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SPISAL_05540 (sdhA)
00720 Other carbon fixation pathways
SPISAL_05540 (sdhA)
Enzymes [BR:
ssal01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SPISAL_05540 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
GIDA
Pyr_redox_2
Thi4
HI0933_like
FAD_oxidored
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AGM41202
UniProt:
R4VL51
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Position
complement(1127679..1129466)
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AA seq
595 aa
AA seq
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MSTDYEITDHTYDVVVVGAGGAGLRATFGMAEKGLKTACLTKVFPTRSHTVAAQGGVSAA
LGNMGEDDWRWHAYDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTEEGKIYQ
RPFGGMTTHFGDGTAQRTCAAADRTGHAILHTLYQQSLAHQAEFYIEFFALDLIMENGEC
RGVIALELATGKIHRFRAHIVVLATGGYGRAWFSCTSAHTCTGDGGGMVLRAGLPLQDME
FTQFHPTGVYGAGCLITEGVRGEGGYLTNSEGERFMERYAPNAKDLASRDVVSRSMTIEI
REGRGVGPNSDHIHLHLEHLGPEVINQRLPGIAETARIFAGVDVTQAPIPVLPTVHYNMG
GIPTNYRAEVVAPRDGDPDAVVPGLMAIGEAGCISVHGANRLGSNSLLDLVVFGRAAAIR
AAEIVADCGEHKPLPADSAAYSLGRLDRLRNADGDEPTAKIREQMQKTMQEYAAVFRTAD
TLEEGSRRIHEIHGMLENVKVVDRSLIWNTDLVETLELENLLGNAVVSLDSALNRQESRG
AHAREDFGERDDEHWMKHTVSWLQESGDVQLDYRPVHMTTLSDEMDVIPPKKRVY
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgattacgagatcacagaccacacctatgacgtggtggttgtcggcgccggt
ggcgccgggctgcgggcaaccttcggtatggcggagaagggcctcaaaactgcctgcctg
actaaagtctttccgacccgtagtcataccgtggcggcacagggcggcgtgagtgccgcg
ctgggtaacatgggtgaggacgactggcgctggcatgcctacgacaccatcaaagggtcg
gattggcttggtgaccaggacgccattgagtacatgtgccgcgaggccataccggccatc
atcgagcttgagcactacggggtgccgttctcccggaccgaagagggcaagatctatcag
cgtcccttcggtggtatgacgacgcactttggtgatggcaccgcgcagcggacctgcgcc
gcggctgatcgcacgggccacgccattttgcacacgctctaccagcagtcgctcgctcat
caggccgagttttacatcgagttcttcgccctcgacctgatcatggaaaatggtgaatgt
cggggggtgatcgccctcgagctcgccaccggcaaaatccaccgattccgggcccacatt
gttgtgttggccaccggtggctacggacgcgcctggttctcctgcacatcagcccatacc
tgtacgggtgatggcggtggcatggtgctgcgtgccgggctgccgttgcaggacatggaa
ttcacccagtttcatccaacgggcgtctatggtgcgggctgtctgatcaccgagggcgta
cgcggcgagggcggttatctcaccaactccgagggtgagcgcttcatggagcgttatgcc
ccgaacgcgaaggatctggcctcacgcgacgttgtctcacgatccatgacgatcgagatc
cgcgagggccgaggtgtcggcccgaacagcgaccacattcatttgcatctcgagcacttg
ggcccggaggtgatcaatcagcgcctccccggtattgccgagacggcccgtatctttgcc
ggcgtcgatgtaactcaggcgcccattcccgtgctgccgacggtgcactacaacatgggc
ggcattccgaccaactaccgggcagaggttgtcgccccacgtgacggcgacccggatgcc
gtggtgcccggcctcatggccatcggtgaggccggttgtatctccgtgcacggggccaat
cggctgggctcgaattccctgctggatctggtggtctttggccgcgcggcggctatccgt
gcggccgagatcgtggcggattgcggtgagcacaagccgctgcccgccgatagcgcggct
tattcgctgggacgccttgatcggctgcggaatgcggatggtgatgagccgacggccaag
attcgggagcagatgcaaaagacgatgcaagagtatgcggcggtcttccgcacggccgat
acgctggaagagggcagccgtcggattcacgaaatccacggcatgctggagaacgtcaag
gtggtggaccgctcactgatctggaacaccgatcttgtcgagacgctggaacttgagaac
ctgctgggcaacgcggtcgtcagtctcgactcggcgctgaaccggcaggagagccgcgga
gcccacgcccgtgaggactttggcgagcgtgatgacgagcactggatgaagcacactgtg
tcctggctgcaggaaagcggtgacgtccagctggattatcgaccggtgcacatgacgaca
ctcagcgacgagatggacgtcatcccgccgaaaaagcgtgtgtactga
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