Spiribacter salinus: SPISAL_05625
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Entry
SPISAL_05625 CDS
T02685
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ssal
Spiribacter salinus
Pathway
ssal03030
DNA replication
ssal03430
Mismatch repair
ssal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPISAL_05625
03430 Mismatch repair
SPISAL_05625
03440 Homologous recombination
SPISAL_05625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssal03032
]
SPISAL_05625
03400 DNA repair and recombination proteins [BR:
ssal03400
]
SPISAL_05625
Enzymes [BR:
ssal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPISAL_05625
DNA replication proteins [BR:
ssal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPISAL_05625
DNA repair and recombination proteins [BR:
ssal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPISAL_05625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AGM41219
UniProt:
R4V5P5
LinkDB
All DBs
Position
1145177..1145881
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AA seq
234 aa
AA seq
DB search
MRAGGGDWPSWMRGQAQRAHQPQLQAFYQTFSLTAEQPISETPLVALDLETSGLDPARSA
ILSIGLIPFDLQRIHLGERRAWVLRPPSGFSGESIPYHHITHSDTQEAPDFADVLPELLD
CLAGHLAVVHYHPIERAFLGRAVQQRFKEPLRFPLIDTMDLEARRYRRGWRTRMRAIFGQ
TPVSIRLGDSRSRYHLPLYEGHQAALDALATAELLQAQIQHHYSPSTAIGQLWI
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagggccggcggcggtgactggccgtcgtggatgcggggacaagcgcagcgcgcgcat
caaccccaactccaggcgttttatcaaacattcagcctgacggctgagcagccgatcagc
gagacacccctcgtcgcgctggacctggaaacgagcgggcttgaccccgcccgcagcgcg
atcctcagcatcggcctgatcccgtttgatctgcagcgcattcacctgggtgagcgacgc
gcctgggtgctacgtccgccatccgggttttccggggagagcattccgtatcaccacatc
acgcattccgacacccaagaggcgccggattttgccgatgtgcttcccgagctgctggat
tgcctcgccggtcacttggcggtggtgcattaccacccgatcgagcgagcatttctgggg
cgcgccgttcagcagcgcttcaaggagccgctgcgctttccgcttatcgacaccatggat
ctggaagcccgacgctatcgtcgcggctggcgaacccgcatgcgagcgatctttggccag
acccccgtttcaatccggctgggagacagccggtcgcgctaccacttgccgctctacgag
ggccatcaagccgcgctggacgcgctagccaccgccgagttactgcaggcgcagatccag
caccactacagtccctcgacggccattggccagctctggatttga
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