Spiribacter salinus: SPISAL_05650
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Entry
SPISAL_05650 CDS
T02685
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ssal
Spiribacter salinus
Pathway
ssal03030
DNA replication
ssal03430
Mismatch repair
ssal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPISAL_05650
03430 Mismatch repair
SPISAL_05650
03440 Homologous recombination
SPISAL_05650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssal03032
]
SPISAL_05650
03400 DNA repair and recombination proteins [BR:
ssal03400
]
SPISAL_05650
Enzymes [BR:
ssal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPISAL_05650
DNA replication proteins [BR:
ssal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPISAL_05650
DNA repair and recombination proteins [BR:
ssal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPISAL_05650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
AAA_22
AAA_5
RuvB_N
AAA_18
Trypan_PARP
RCF1-5-like_lid
PIF1
AAA_30
AAA_2
AAA_14
Herpes_Helicase
AAA_28
AAA_19
DUF3646
ResIII
SKI
AAA_assoc_2
Mg_chelatase
TsaE
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGM41224
UniProt:
R4V5P9
LinkDB
All DBs
Position
complement(1149127..1150737)
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AA seq
536 aa
AA seq
DB search
MTYQVLARKWRPRSFAEMVGQSHVLRALGNGLANGRLHHAYLFTGTRGVGKTTVARILAK
CLNCEANGVTDVPCGTCSACLEIDEGRFVDLIEVDAASRTKVEDTRDLLDNVQYAPSRGR
FKIYLIDEVHMLSAHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTVLSRCLQFNLKPLL
PQMITGQLERIAEAEGINVEPAALQRLATAADGSMRDALSLTDQALAFGGGALADAEVRE
MLGTLPQEHLCDLLDCLAAGDGVALLAAIERLAETSPDFDEALAELLVMLHQLTLAQTVP
DVLDGEGLADERLRTIVQQFDAPGVQLLYQIALIGRRDLPLAPDPRTGFEMTLLRMLAFQ
PDVVPSATDAAPRAAPERTPAPAPRAEPELGPEPEPEPEPEPEPTSPSTAGAVDWHALVA
SLPLSGMARALADHCDWAGEERGRVTLRMDAGHSHLLNETVKTRLAEALSTHFGRPLSVE
VRTGAVQSETPAAAAERTEAERQAAAREAIETDPNIAALRETFGAEVMSDSIRPRD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgacgtatcaggtgcttgcccgcaaatggcggccgcgcagtttcgcggaaatggtcggc
cagagccatgtgctgcgtgcgcttggcaatggcctcgccaatggccgcctgcaccatgcg
tatctgttcacgggcacgcgtggtgttggcaagaccaccgtggcgcggattctggcgaag
tgcctgaactgcgaggccaacggcgtcacggatgtcccttgtggcacgtgctccgcctgc
cttgagatcgatgaaggccgcttcgttgatttgattgaggtagacgccgcctcccgaacc
aaggtcgaggacacgcgcgacctgctcgataatgttcaatacgccccaagtcgcggtcgc
ttcaagatctacctcattgacgaggtccacatgctctcggcgcacagtttcaatgcgctg
ctgaaaacgcttgaagaaccgccggcgcatgtcaaatttctgctggcgaccaccgacccg
cagaaactgccggtgacagtgctttcgcgctgccttcagttcaatctcaagccgctgttg
ccgcagatgatcaccggtcagctcgagcgaattgccgaggctgaggggatcaacgtggag
ccggccgctctgcaacggctcgcgaccgcagcggatggcagcatgcgcgatgcgctgagc
ctgaccgatcaggcgctggcctttggtggcggcgcactggctgacgccgaggttcgggag
atgctggggacgttgcctcaggagcatctgtgcgacctgctggattgcctggctgctggc
gacggcgtggcgctgcttgcggcgatcgagcgccttgccgagacctcgccggattttgat
gaggcgctggccgagctcctggtgatgctccatcagctcacccttgcgcagacggtgcca
gatgtccttgatggcgaagggctcgcggatgaacggttaagaacaatcgtgcagcagttt
gacgcccctggcgtgcagctgctctatcagatcgcgctgataggccgccgcgatctgccg
ctggccccggatccgcgcacgggctttgaaatgaccctgttgcgaatgctggcctttcaa
cccgacgtcgtgccgtccgccacagatgcagcgcccagggcggcgccggagcgcacgccc
gcacccgcacctcgagccgagccagagcttgggcctgagcctgagcctgagcctgagcct
gagcctgagcccacgtcgccgtctacggcgggcgcggttgactggcatgcgctggtggcg
agtcttcccctgagtggcatggcgcgtgcgctggcggatcattgtgactgggctggcgag
gagaggggtcgggtgaccctgcgcatggacgctggccacagccatctgctaaacgaaacc
gttaagacacgcctcgctgaagccctctccacacattttggccggccgctgagcgttgaa
gttcgtaccggtgcagtgcaaagcgagacgccggccgcggccgcggagcgaactgaggca
gaacgccaggccgccgcgcgtgaggccattgaaaccgatccaaatattgcggcacttcgg
gaaaccttcggtgccgaagtgatgagtgactccatcaggccacgggattag
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