Spiribacter salinus: SPISAL_07350
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Entry
SPISAL_07350 CDS
T02685
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssal
Spiribacter salinus
Pathway
ssal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPISAL_07350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssal03021
]
SPISAL_07350
03400 DNA repair and recombination proteins [BR:
ssal03400
]
SPISAL_07350
Enzymes [BR:
ssal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SPISAL_07350
Transcription machinery [BR:
ssal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SPISAL_07350
DNA repair and recombination proteins [BR:
ssal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SPISAL_07350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
BetaGal_dom3
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AGM41564
UniProt:
R4V6L4
LinkDB
All DBs
Position
complement(1509631..1510629)
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AA seq
332 aa
AA seq
DB search
MQGQFKDFLKPRVVHVDAVSDSRARITLEPLERGFGHTLGNALRRVLLSSMPGFAVTEVE
IEGVLHEYTAIEGVQEDVVDVLLNLKNLAVRLTGRDEATVRLHKKGPGVVTAADISAEQN
VEVKNPDLVICNLTKAGEISMSITISSGRGYEPATARDTDEERTIGRLALDATYSPVRRV
AYNVESARVEQRTDLDKLVMDIETSGVIEPEEAIRLAAGVLRDQLSVFVDLEGGEGEYEP
KRREPEVDPVLLRPIDDLELTVRSANCLKAESIHYVGDLVQKTEVELLKTPNLGKKSLNE
IKEVLAQHGLQLGMRLENWPPAGLEDRSRATG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtcagtttaaggatttccttaaaccgcgcgtggttcacgttgacgccgtcagc
gatagccgcgcccggattacgcttgagccgctggagcgcggttttggtcatacccttggt
aacgcgctgcggcgtgtgctgctgtcttcgatgcccggctttgccgtcaccgaagtcgag
atcgagggcgtcctccacgagtacaccgccattgagggtgtccaggaagacgtggtcgac
gtgctactgaacctcaagaacctggccgtgcgcctgaccggccgcgacgaggccacggtt
cgccttcacaagaagggcccgggcgtggtgacggcggcggacatcagcgctgagcagaac
gttgaggtgaaaaaccccgatctggttatctgcaacctgaccaaggccggcgagatcagc
atgtccatcaccatctccagcggtcgcggctatgagccggcgacggcgcgggataccgac
gaggagcgcaccattggtcgcctcgcgttggatgccacctacagccccgtacggcgggtg
gcctacaacgtcgaaagtgcccgtgttgagcagcgcaccgatctcgacaagctggtcatg
gacatcgagaccagcggcgtgatcgagcctgaagaggccattcgtctggccgctggcgtg
ctgcgtgatcagctgtcggtgtttgttgacctcgaggggggtgagggcgagtacgagccc
aagcgccgcgaacccgaggtggatccggtgctgctgcgcccgatcgacgacctggaactg
acggtgcgctccgccaactgtttgaaggccgagagcattcactacgtgggcgatctggtg
cagaagaccgaggtcgagctgctcaagacgccgaaccttggcaagaaatcgctgaacgaa
atcaaggaagtcctggcacagcacgggcttcagctcggaatgcgtctcgagaactggccg
ccggccggcctcgaggaccgcagccgggcgacgggctag
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