Spiribacter salinus: SPISAL_08115
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Entry
SPISAL_08115 CDS
T02685
Name
(GenBank) polysaccharide biosynthesis protein CapD
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
ssal
Spiribacter salinus
Pathway
ssal00541
O-Antigen nucleotide sugar biosynthesis
ssal00552
Teichoic acid biosynthesis
ssal01100
Metabolic pathways
ssal01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ssal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SPISAL_08115
00552 Teichoic acid biosynthesis
SPISAL_08115
Enzymes [BR:
ssal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
SPISAL_08115
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
GDP_Man_Dehyd
RmlD_sub_bind
NAD_binding_10
KR
NAD_binding_4
3Beta_HSD
adh_short
CoA_binding
PglD_N
Motif
Other DBs
NCBI-ProteinID:
AGM41717
UniProt:
R4VMT7
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Position
complement(1671737..1673692)
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AA seq
651 aa
AA seq
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MSNRLKGVFDWQRPRKQALMMAGDAVMMMLVVWAAFSLRMGDVLSDKLFAYWYLPLVLPL
LSVPLFYWSGMYSAVVRYMGPSDVWAVVRGVTLSTLVFVAIVAFLGLQGVPRATITIYWL
IALLLIGGSRFLIRAWHQADRHRRAAEEPVIIYGAGSAGLQLVSSLLSTGDYLPVAFVDD
NPRLHGTMIRGVPVYPPMRLGRLIAQLGVGNILLALPTATLGRRREILATLERYPVHVRT
LPSMTDLVSGAARLQDIREVDVEDLLGREAVPPDPDLLGRCVTRQSVMITGAGGSIGSEL
CRQVLAQSPRRLVLLERSELALYRIEQELTALASVNDQTIEIIPVLGSVLHRKRMRHSLE
RYGVDTVYHAAAYKHVPLVEANPVEGVRNNGFGTWHAALAAEDAGVSHFVLVSTDKAVRP
TSVMGASKRIAEFAVQAIAARGSTTRFGIVRFGNVLDSSGSVIPLFRRQIREGGPVTVTH
PDATRYFMTIPEAASLVIQSGAMANAGEVFVLDMSEPVRIRDLARRLIQLSGCSVRDQGN
AKGDIAIEFIGLRPGEKLHEELVQGDDIMGTSHPMILQAREAHPEWRVFVDWITALDEAF
HAQDLERVMALVVECVPGYRRQALASAGTRADSQGADVVSIQRPSAGFRKI
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccgcctgaaaggggtgttcgactggcagcgaccgcgcaagcaggcgctcatg
atggccggtgatgcggtcatgatgatgctggtggtctgggcggcgttctcgctgcgcatg
ggtgatgtgctctcggacaagctctttgcctactggtacctgccgcttgttttgcccctc
ctcagcgtgccgcttttttattggtctggcatgtatagcgcggttgtccgctacatgggt
ccctccgacgtctgggcggttgtgcggggcgtgaccctctcaacgcttgtctttgtcgcg
atcgttgcctttttgggtcttcagggcgtgccgcgcgccacgatcactatctactggttg
atcgcgcttttgcttattggcggtagccgattcctgatccgggcctggcatcaggcggat
cggcatcggcgtgccgctgaagagcccgtgatcatttacggggccggctcagcggggctg
cagctggtcagctcactgttgtcgacgggggattacctgcctgtggccttcgtggatgac
aacccacgtttgcacggcacgatgatccggggcgttccggtctacccgccgatgcggctg
ggtcggcttatcgcccagctgggggtcggcaatatcctgctggccctacccacggccacg
ctgggccggcggcgtgaaattctggcgacgctggagcggtatcccgtgcatgtgcgcacg
ctccccagcatgacggacctcgtttcgggcgcggcgcgcttgcaggacattcgtgaagtg
gatgtcgaggacctgttggggcgcgaggcggtcccgcctgatccggatttgctcggccga
tgtgtaacgcgccagtccgtgatgatcaccggcgctggcgggtcgatcggtagcgaactc
tgccgacaggtgctggcgcagtcaccccgtcgccttgttttgctggagcgctccgagctg
gcgctctatcgaatcgagcaggaactcacggcactggcgagcgtgaatgaccagacgatc
gaaatcatcccggtgctgggctcggtgcttcatcgcaagcgcatgcggcatagcctcgag
cgctatggtgtggatacggtgtatcacgcggcggcttacaagcacgtgccactggtggaa
gccaacccggttgagggggtgcgtaacaatggctttggcacctggcatgcggcgttggcc
gctgaagacgcgggtgtgagtcattttgtgcttgtctcgacggataaggcggttcgtccg
accagtgtgatgggcgccagtaagcggattgccgagtttgcggtgcaggcgattgccgcc
cgcgggtcgacgacacgctttgggattgtgcggttcggcaatgtgctggactcgtcgggt
tcggtgattccgttgtttcggcgtcagattcgtgagggtggcccggtcactgtgacccac
ccagacgccacgcgctatttcatgacgatccccgaggcagccagcctcgtgattcagtcg
ggggcgatggcaaacgccggtgaggtgtttgttctggatatgagtgagccggttcgcatc
agagatctggcgcgtcggttgattcaactcagcgggtgttccgtacgtgatcagggcaac
gccaaaggggatatcgcgatcgaattcattgggttgcgtcccggagaaaagctccacgag
gagctggtccagggcgacgatatcatgggtacatcacatcccatgatcctgcaggcgcgg
gaagcgcatcccgagtggcgagtcttcgtggactggataaccgcactcgatgaggccttt
cacgcccaggatttggagcgcgtcatggcactggttgttgagtgcgtgccggggtaccgg
cgacaggcattggcaagcgctggtacgcgcgctgactcgcagggagctgatgtcgtgtcg
attcagcggccgtcagccggtttcagaaagatttga
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