Spiribacter salinus: SPISAL_08280
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Entry
SPISAL_08280 CDS
T02685
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssal
Spiribacter salinus
Pathway
ssal03030
DNA replication
ssal03410
Base excision repair
ssal03420
Nucleotide excision repair
ssal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPISAL_08280
03410 Base excision repair
SPISAL_08280
03420 Nucleotide excision repair
SPISAL_08280
03440 Homologous recombination
SPISAL_08280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssal03032
]
SPISAL_08280
03400 DNA repair and recombination proteins [BR:
ssal03400
]
SPISAL_08280
Enzymes [BR:
ssal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPISAL_08280
DNA replication proteins [BR:
ssal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SPISAL_08280
DNA repair and recombination proteins [BR:
ssal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SPISAL_08280
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPISAL_08280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AGM41750
UniProt:
R4VA03
LinkDB
All DBs
Position
complement(1704385..1707126)
Genome browser
AA seq
913 aa
AA seq
DB search
MTSSEKRLLLVDGSSYLYRAYHALPPLTSAEGDPTGAIYGVISMLRRLVADYEPIYMGVV
FDAPGKTFRDELFAEYKANRPSMPEDLAAQIKPLKKAVIAMGLPLVEVGGVEADDVIGTL
AVRGRSAGMELVISTGDKDMAQLVNGDVTLLNTMSNTVLDHDAVVEKFGVPPERIIDYLA
LVGDTSDNIPGVPKVGPKTAAKWLNQYGSLDAVRDRADEIAGKVGESLREHLDALDLSRQ
LATIHCDVELPVTPGDLKVADPDFEALTQLFRRFGFNAWLREVDPTVVDTQTSPDHSEGE
LLDTHNPAAPSAHYSCIQDQATLDEWITRLEAAEVFAFDLETDSLNYMEARIVGASFAVK
SGEAAYLPLAHAGPDQPQQLDRDATLERLRPLLEKLDTHKLGQNLKYDTSVLANHGITLR
GVVHDTMLESYCLDATANRHDMDTLASKYLGYQPISYEQVAGKGAKQITFDQVALAEATD
YAAEDADVALRLHEHLWPRLAEQAGPRSIYESIEIPLLPVLSRIERTGVRVDAELLGVQS
RELAETMQQLEAQAYGAAGGPFNLGSPKQIQEILYERQGLPVLSKTPKGAPSTAESVLEE
LAAQGHELPQLILDYRGVSKLRSTYTDKLPTLINPNTGRVHTSYHQAITATGRLSSSDPN
LQNIPVRSAAGRRIRRAFIPAEGHRLMAADYSQVELRIMAHLSGDEGLKRAFAEGQDIHA
ATAAEVFGTSAEAVTADQRRAAKAINFGLIYGMSAWGLARQLNIERGEAQRYVDRYFERY
PGVRAFMDRTRETARQQGYVETVDGRRLYVPEINSRNNQRRQYAERTAINAPMQGTAADI
IKRAMIAVDAWITAESPGTALVMQVHDELVLEVLDSQVQDVAERIRGFMAEAASLDVPLE
VEIGVGENWDDAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttccgagaaacgtctgctgctggtggacggctcgtcttacttgtaccgcgcc
taccatgcacttccgcccctcacgagcgcagagggtgacccaacgggtgccatatacggg
gtgatcagcatgctgcgtcgcctggtggccgattacgagccgatttacatgggggtcgtg
ttcgatgcgccggggaagacgttccgcgatgagctgttcgctgagtacaaggccaatcgc
ccatcgatgccggaggacctcgcggctcagatcaagccgctaaaaaaggccgtgatcgcg
atggggttaccgcttgtggaagtcggcggtgttgaggctgacgatgtaattggcacattg
gcggtccgtggccggtcggccggcatggagctggtgatttccaccggcgacaaggacatg
gcccagctggtgaatggcgatgtcaccttgctgaacaccatgtccaataccgtgctggac
catgatgccgtggtggagaaattcggagttccaccagagcgcattatcgactacctggcg
ctcgttggggatacctcagacaatattccgggcgtccccaaggtcggtccgaaaacggcg
gcgaaatggctgaaccagtatggctccctcgacgcggttcgcgatcgcgcggatgagatt
gctggtaaggttggagagagcctccgagaacatctggatgcgcttgatctctcccgccag
ctcgccacgattcactgcgatgtcgagctcccggtaacgccgggcgatctgaaagtcgcc
gatccagatttcgaagccctcacccagctcttccgtcgctttggttttaacgcctggctt
cgagaggttgatccaacggtagtggacacccagacatcccctgatcactcagagggtgag
ttactggacacccacaatccggcagcgccaagcgcgcactacagctgcatccaggaccag
gcgacgctggatgagtggatcacgcgactcgaggccgcggaggtgtttgcgtttgatctc
gagactgacagcctgaattacatggaggcccggattgttggcgcctcgttcgccgttaaa
tcgggagaggcggcctacttgccactggcgcatgccgggccggatcagccgcagcagttg
gatcgcgacgcgacgcttgagcgtctgcgcccgctgctcgagaaactggacacccacaaa
ctgggccaaaacctcaagtacgacaccagcgtgctcgcgaaccacgggattacgctgcgc
ggcgtggtgcatgacacgatgctggagtcgtactgcctggacgccacggcgaatcgtcac
gacatggatacgctggccagtaagtaccttggctatcagccgattagctatgagcaagtg
gcgggcaagggcgccaagcaaatcacctttgatcaggttgcgctggccgaggcgacggac
tatgcggccgaagatgccgatgttgctctgcgtctccatgagcacctctggccgcggctc
gctgagcaggcggggcctcggtcgatttatgaatcgattgagatcccgctgctgcctgtc
ctctcgcggatcgaacgcacgggcgtccgcgtcgacgccgaattgttgggtgtccagagc
cgggaactcgccgagaccatgcagcagctggaagcccaggcgtatggggcggcgggcggg
ccattcaatctgggctctccaaagcagattcaggagatcctttatgagcgtcagggcctg
ccagtgctctcgaaaacgccgaagggcgccccttcaaccgccgagtctgtgcttgaggaa
ttggcggctcagggccatgagctaccgcaattaattctcgattaccggggcgtctcgaag
ctgcgctcgacctacacggacaagttgccgacactcatcaacccgaacaccggacgggtg
cacacctcttatcaccaggcgattacggcgaccgggcggttgtcatcgtccgatcccaat
ctccagaacatcccggtgcgtagcgcggccggccggcgcattcgccgcgctttcattccg
gccgaaggccatcggctcatggcggcagactactcccaggttgagttgcgcatcatggcg
cacctgtccggtgatgaggggctcaaacgcgcgttcgccgaaggacaggacatccacgcc
gcgacggcggccgaggtctttgggacgagcgccgaggctgtaacagcggatcagcgtcgc
gcagccaaggccatcaatttcggcttgatctatgggatgtcggcctgggggctggcgcgt
cagctcaatattgagcgtggcgaggcgcagcgttatgtcgatcggtatttcgagcgctac
cccggtgtccgtgccttcatggaccggactcgcgaaaccgcgcgccagcagggttatgtg
gaaaccgtggatggccgtcgcctttacgtaccggagatcaacagccgcaacaatcagcgt
cggcaatatgccgaacgcaccgcgatcaacgcgccgatgcaaggtaccgcagccgacatc
atcaagcgggccatgattgcagtggacgcgtggattaccgctgagtcgcctggcacggcc
cttgttatgcaggtccacgacgagctcgtgctcgaagtactggacagccaggttcaggac
gtcgctgaacggattcgcggcttcatggccgaggccgcgtcgctggatgtgccgctggag
gtggaaatcggggtcggagaaaattgggacgatgcccactga
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