Spiribacter salinus: SPISAL_08290
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Entry
SPISAL_08290 CDS
T02685
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssal
Spiribacter salinus
Pathway
ssal03420
Nucleotide excision repair
ssal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPISAL_08290
03430 Mismatch repair
SPISAL_08290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssal03400
]
SPISAL_08290
Enzymes [BR:
ssal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPISAL_08290
DNA repair and recombination proteins [BR:
ssal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPISAL_08290
MMR (mismatch excision repair)
Other MMR factors
SPISAL_08290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
DUF4391
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AGM41752
UniProt:
R4VMW9
LinkDB
All DBs
Position
complement(1708003..1710177)
Genome browser
AA seq
724 aa
AA seq
DB search
MDVSDLIDPLNDAQREAVAAPLGRALVLAGAGSGKTRVLTHRAAWLVRVEGTTPYNLLAV
TFTNKAAAEMRGRIERLLGISGSGMWVGTFHGLSHRLLRLHWKEAGLPQGFQILDSEDQR
RLVKRVMRDLEVDENRWPVRQLQGFINARKDAGERPDDLDSNDPYTGQMARVYAAYEAAC
RSAGVVDFAELMLRTVEMLQNHLELLGHYRRRFAHVLVDEFQDTNGIQYQWLKLLAGPEA
DVFIVGDDDQSIYGWRGARVENLQRFRSDYSDTRVLRLEQNYRSTSTILEAANALIALNS
DRLGKKLWTEGEQGDPIALYAAFNEQDEARFVIERLVSLIDDQGLARSDVAILYRSNAQS
RTFEEALLSRRIPYRVYGGLRFFERAEIKDALAYLRLIANRDDSAALERVINTPTRGIGN
RTLEAIRLAAREQDVSLWRAASGLFASHGALPARAANALGAFLGLIDRLAAETADMALAD
QLETVLDRSSLRAHVGKDRSERAQDKLENLDELITAARNFQQDAQIDEGMDPLTAFLSHA
ALEAGEGQAGAWEDCVQLMTLHSAKGLEFPVVFLVGLEEGLFPHRMSVEEPGRLEEERRL
AYVGITRARQQLVMTYAERRRLHGRDEFGIASRFIRELPPELVDEVRARFSVTGPGVAAS
QGGMAGAVAPEAEFGLGERVQHSRFGEGVVLDCEGNGPNARIQVNFDAVGAKWLVAAYAN
LERV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctctgacctcatcgacccgctgaacgacgcgcaacgtgaagccgtcgccgcc
cccctgggtcgggcgcttgtcctggcgggcgctggcagcggcaagacgcgcgtcctcacc
catcgtgcggcttggctggtgcgggtggagggcacgacgccgtataacctgttggcggtg
acgttcacgaataaggctgccgcggagatgcgcggtcgcatcgagcgtttgctgggcatt
tcgggttcgggcatgtgggttggcaccttccatggcctgtctcaccgcctgcttcgcttg
cactggaaagaggcgggtctgccccagggctttcaaatcctcgacagcgaagatcagcgc
cgcctcgtcaaacgggtgatgcgcgatcttgaagtcgatgaaaatcgttggcccgttcgc
cagctccaggggttcatcaatgcgcgcaaggatgctggtgagcgtccggacgatctcgac
agcaatgatccctataccggtcagatggcccgcgtgtatgccgcttatgaggccgcctgc
cgcagcgcaggcgtggtggatttcgccgagctcatgctgcgcacggtcgagatgctccag
aaccatctcgagttacttgggcattaccggcgtcgctttgcccatgtgctcgtcgacgag
tttcaggataccaatggcattcagtatcagtggctcaagctgcttgccggcccggaggcg
gatgtcttcattgtgggtgatgacgatcagtccatttacggctggcgcggtgcgcgggtt
gagaacctgcagcgttttcgcagcgattacagcgacacacgcgtgctgcgactggagcag
aactaccggtccacctcgacgattctggaagccgccaacgcactcattgcgctgaacagc
gatcgcctgggcaaaaagctgtggaccgagggcgagcagggcgaccccatcgcgttgtat
gccgcgttcaatgagcaggatgaggcgcgttttgttatcgaacggctcgtgagcctgatc
gatgaccagggactcgcccgaagcgatgtcgccattctctaccgatccaacgcgcaatcg
cggactttcgaggaggccctcctatcccggcgcatcccgtatcgcgtgtacggcggcttg
cgattcttcgagcgcgcggaaatcaaggacgcccttgcgtatttgcgcttgatcgccaat
cgggatgacagcgcggccctcgagcgcgtcattaatacgccgacgcgggggattggcaat
cgcacccttgaggcgatccggctggcggcgcgggagcaggacgtcagtctgtggcgagct
gcctcaggcctctttgcaagccacggcgccctgcccgcgcgcgccgcgaatgcgctgggt
gcctttctcggtctgatcgaccggctggcggccgagacggccgacatggcgctcgctgat
cagcttgagacggtcctcgatcgcagcagcttgcgcgcgcatgtggggaaagatcgctct
gagcgggcgcaggacaagctcgagaacctcgatgagctgattaccgccgcgcgcaatttt
cagcaggatgcgcagatcgacgagggaatggatccactgactgccttcctgtcccacgcc
gcactggaagcgggcgagggccaggctggcgcctgggaggactgtgtccagctcatgacc
ctgcattcggccaagggcctggagtttccggtggtgttcctcgtgggcctggaggaaggg
cttttcccccatcgcatgtcggttgaggagccgggtcgacttgaggaagagcgccggctg
gcctacgtcggcatcacccgggcgcgacagcagttggtgatgacctatgccgagcgccgt
cgcctgcacggccgggatgagttcgggatcgcgtctcgatttattcgcgagctgccgccg
gagttggtggatgaggttcgggcgcgcttttcggtgacgggtccgggggttgccgccagt
caggggggtatggctggcgcggtggcgccagaggcggaattcgggctcggtgagcgcgtg
cagcatagccgtttcggtgagggcgttgtgctggattgtgagggcaacggcccgaacgcc
cgcatccaggtcaactttgacgcggtcggcgctaagtggctggtggcggcctacgccaat
ctcgagcgggtttga
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