Swingsia samuiensis: E3D00_00475
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Entry
E3D00_00475 CDS
T06080
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssam03009
]
E3D00_00475
Enzymes [BR:
ssam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
E3D00_00475
Ribosome biogenesis [BR:
ssam03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E3D00_00475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QDH16213
UniProt:
A0A4Y6UF85
LinkDB
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Position
105539..106876
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AA seq
445 aa
AA seq
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MTVVTIMTSEDITGAISVKVEGLGYSGDGFVKYNEEKFFIPNTLPDETLKIRFSGSRPEL
IEILEPSQNRVSPVCNLFNTCGGCALQHMSLPALLDWKTSKVANALNGAGFSNLPQPNQY
QTSPKTRRRMDFAIQRIPGNIILGLHRRNGDPVDMQECQLLDERLFNLLPDLREMLSHLG
AITGRASLVINLFDSGADFTLSTSAALSASDRMKIADFTQKHHIPRFSWQDPKNHIIETV
AQTQSVRHTFQSGVASPPPSAFLQATPDAEEKIVESVLSGLPALNRKDIITELFAGCGTL
TFPLSEKGRVIAFEGESQAASCLKQASGGKRIESHNRDLMRRPLLPHDLKSTRVVVLDPP
YGGASAQMLPLSKSTVSDIVYISCNPTALEKDAAVLKKAGFSVIDWSVIDQFLWSTEVES
VITFSRDQKRIKRENSRRTHSAPSH
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgtcactataatgacaagtgaggatataacgggggctatttctgtaaaagta
gagggactgggctattcaggggatggcttcgttaaatataacgaagaaaaatttttcatt
ccgaatacgcttcctgatgaaactctaaaaattcgtttttctggttctcggcccgaatta
atagaaattttagagccttcccagaacagagtgagccctgtgtgtaacctgttcaatacc
tgcgggggatgtgccctacagcatatgtctcttccagcattgctagactggaaaacatcc
aaggtcgcaaatgcattaaatggtgccggcttttcgaacctacctcagcccaatcagtat
caaacatctcctaaaacacgacgccgtatggattttgctattcaacggatccccgggaat
attattctagggttacaccgcaggaatggcgaccctgttgatatgcaagaatgtcaactt
cttgatgaacggctttttaatttacttcctgatttacgtgagatgctttcccaccttggc
gcaataacaggacgtgcaagtttagttattaatttatttgatagtggagcagactttacc
ctttctacttctgccgccctctctgcctcagaccgtatgaaaattgctgatttcactcag
aaacatcatatccctcgcttttcatggcaggatcctaaaaatcatattatcgaaacagtg
gctcaaacccaatctgttagacatacttttcagtcaggcgttgcctctcctccgccttct
gcattcttacaagcaacgccagatgcagaagaaaaaatagtagaatccgttctttccggt
ttacccgctctaaaccggaaagacattatcactgaactttttgctggatgtggcacactc
actttccctctttcagaaaaaggacgtgtcatcgcttttgaaggagaatcccaagcagcc
tcatgcttaaaacaagcatcgggtggtaaacgaattgaaagccataaccgagatttaatg
cgccgccctttattacctcacgacttaaaatcaacacgtgtcgttgtgttagaccccccc
tatggcggcgcctctgctcaaatgcttcccctttctaaatcaacagtttcagatatcgtt
tatatcagttgtaatcccacagctttagaaaaagacgctgccgttctcaaaaaagctgga
ttttctgtaatagactggtctgttatagaccagtttttatggtccacagaagttgaatct
gttattacattttctcgtgatcaaaaacgcatcaaacgtgaaaactctcgccgcacccac
agcgccccttctcattag
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