Swingsia samuiensis: E3D00_01020
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Entry
E3D00_01020 CDS
T06080
Name
(GenBank) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ssam
Swingsia samuiensis
Pathway
ssam00040
Pentose and glucuronate interconversions
ssam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
E3D00_01020
Enzymes [BR:
ssam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
E3D00_01020
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
QDH16310
UniProt:
A0A4Y6UHM1
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Position
complement(212024..213223)
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AA seq
399 aa
AA seq
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MMMFKSILPSLCFLTVLQLSGLGASASAQDRRDVKPPSWPRQICAELVPADVGRLQSVLD
DCPSGSALRLRHGRFVSAPLTVTSGVFLWVDQDATLVATSDPLTYDRGTGLCGKLDEKGN
ACRPFLLFQHTRGGGLIGKGTIEGQGDKPMFGSSLTWWQLARSAQNEDLKQNAPRLITLD
HVRDFTLGYITIKNSPNFHVVINQSAGVTLWGVTIDTPADARNTDGIDPISSHDITIAHS
IIRTGDDNIAIKAGRSGASHHMSILDSQFYWGHGLSIGSETMGGVHDILVKDVTIDGAKW
GVRIKSNATRGGKVEHIVYENLYICHTPWPIFLDTHYDQKDEGSDIPLYKDILFKNINID
SGTVYIHGYDENNLSTVSFENLVTQSKVKWSTEYAHISK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtttaagtctattttaccaagtttatgtttcttgactgtgcttcaattgagt
ggtcttggtgcgtctgcttctgcgcaagatcggcgtgatgtaaagccgccgtcgtggcct
cgtcagatatgtgcagaacttgttcctgctgatgtaggccgcctacaatcagttcttgat
gattgcccttctggttctgctcttcgtttaaggcatgggcgttttgtgagtgccccatta
acggtaacgtctggcgtttttttatgggttgatcaagatgcgacgttggtcgcaacgtct
gatccgctgacatatgatcgtggtacgggcttatgtggtaagctcgatgaaaaaggaaat
gcttgtcgaccatttttgctgtttcaacatacgcgtggtggcgggttgattgggaaaggg
acgatagaggggcagggtgataagcctatgttcggctcatcattaacgtggtggcagctt
gctcgaagtgctcaaaacgaagacttaaagcaaaatgctcctcggttaattacgctagat
catgtgcgtgattttacgctggggtatatcaccatcaagaactccccgaattttcatgtt
gtgattaaccaaagtgcaggagtaaccctatggggagtgacgatagatacgcccgcagat
gctcgtaatacagatgggatagatccgatctcgtcgcatgacattacgattgcacatagt
attatccgaacaggggatgataatattgctattaaggcaggccgaagtggggcaagccat
catatgtcaattctggatagccagttttactgggggcacggtctttcaatcggtagtgaa
acaatgggtggcgtacacgatatcctagttaaggacgtgacgattgatggagcgaagtgg
ggagttcgtattaagagtaatgcaacgcgtggtggtaaggtagagcatatcgtttatgag
aatttgtatatatgtcatactccatggccgatttttttagatacgcattatgatcagaag
gacgaaggaagcgatattcctttgtataaagatattttgttcaagaatattaatattgat
agcggaactgtttatattcatggatatgatgagaataatttatcaacagtttcttttgaa
aatttggttactcaatcaaaagttaagtggtctacggagtatgctcacattagtaagtga
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