KEGG   Swingsia samuiensis: E3D00_01065
Entry
E3D00_01065       CDS       T06080                                 
Name
(GenBank) type VI secretion system protein TssL
  KO
K11892  type VI secretion system protein ImpK
Organism
ssam  Swingsia samuiensis
Pathway
ssam03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ssam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E3D00_01065
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ssam02044]
    E3D00_01065
Secretion system [BR:ssam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   E3D00_01065
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: QDH16319
UniProt: A0A4Y6UFK0
LinkDB
Position
complement(224194..225540)
AA seq 448 aa
MGDPHMMGTNNPFVEEDDDRTVIMSRDKISALSARQNVVNAEKSEAQDIEFSSLLRGDEA
PVVACAGSLLTLMARLRNTISVPNAGVLRERAVREVERYGSALRDAHIQTDKIRLAHYIV
CASLDDVVQCTPWGSHGPWADLSLTSAYHRDVRGGERFFGILKKLLESPNAYIDVIELMY
LCMSLGMQGQYRLMPRGPAEFERIREETYATIVRVRGTAGADLSRHWVGVAEPYRPLRFE
MPVWLALILGVGLVGMAYALALLAAGGASDSLMASASALPPHSMPAISRTNMVPPAPVIP
DSDRLRQRILASLQGDIHDGTLSILGNQRILVIRIQSQGMFETGGTNITPQYAAVLRRVG
DAIGQSKAHINVVGYTDSQPIRTVSYPSNYELSLARAQAAADIMVPYVGKANVHASGQGA
LSPVGDNATPEGRRANRRVEIFVEEDRP
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgggcgatccgcacatgatgggcacaaataatccgttcgtagaggaagatgacgatcgt
accgtcatcatgtcacgtgataagatatcggccttatctgcgcgacaaaatgttgtaaat
gcagaaaagtctgaagcgcaggatattgagttttcgtctttgttacgtggagatgaggcg
cctgttgtagcttgtgcaggctcgttgttgacattaatggcacgtttacgaaacaccatt
agtgttccgaatgcgggtgtcttgcgtgagcgtgccgtccgtgaggttgagcgttatggc
tctgctttacgggatgctcatattcaaacagataaaattcgcctagcgcattatattgtt
tgtgcgagcttggatgatgtcgtgcaatgtacgccatgggggtctcatgggccatgggct
gatctgtctttaacatctgcgtatcaccgtgatgtaaggggtggagagcgcttttttggt
attttgaaaaagcttttagaaagccccaatgcgtatattgatgtaattgaattaatgtat
ttgtgcatgtcgttagggatgcaggggcaatatcgtttaatgccacggggcccggcagag
tttgagcgtatccgtgaagaaacatatgcgacgatcgtccgtgttcgcggaacggcgggt
gctgatttgtcgcgacactgggttggtgtggcggagccatatcgtccattgcgttttgaa
atgccggtttggctcgctttgattttgggcgttgggttggttgggatggcctatgcctta
gcgcttttagctgccggtggagcgtctgattctttaatggcgagtgcatcggctctacca
ccacattccatgcctgctatttcacggacaaacatggttccacctgctcctgttattcct
gattctgaccgtttgcggcagcgtattttggcttctttgcaaggggatattcatgacgga
acattgagcatccttgggaaccagcgcatacttgttattcgtattcagagccaaggaatg
ttcgaaacgggtggtacgaacattacaccacaatatgccgcggtattgcgtcgtgtagga
gacgcgataggtcaaagcaaagcgcatattaacgttgtcggatatacggattcacaaccg
atccgtactgtttcgtacccatcaaattatgagctgtcgttggcgcgtgcacaagctgcc
gcagatattatggtgccttatgttggtaaggctaatgtgcatgcatcaggacaaggtgca
ttatccccagttggagataatgccacaccagaaggacgtcgcgctaatcgacgggtagag
attttcgttgaagaggatcgcccatag

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