Swingsia samuiensis: E3D00_01785
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Entry
E3D00_01785 CDS
T06080
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ssam
Swingsia samuiensis
Pathway
ssam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3D00_01785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssam03019
]
E3D00_01785
Messenger RNA biogenesis [BR:
ssam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E3D00_01785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QDH16440
UniProt:
A0A4Y6UHZ9
LinkDB
All DBs
Position
376469..376981
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AA seq
170 aa
AA seq
DB search
MNNPQSLPYRPNVGIALFNPQGLLFVAQRADLPGEIWQCPQGGIDEQEDPLKAAQRELYE
ETGCKQATLLGEKKDWVSYDLPPALIGRALGGKYRGQTQKWYVFGFDGHDHDIRLDLHTP
PEFSAWEWVPPQELLQRNLGFKRELYEKLLPELEHIYQAASKDWIRTKRA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaataatccacaaagccttccttaccgccccaatgtcggaattgctcttttcaaccct
cagggtttactctttgtcgctcaaagggcagatcttcccggggagatttggcaatgcccc
caaggtggaatagatgaacaagaagatccattaaaagcagctcaaagagagctctatgaa
gagacaggctgtaaacaagccactcttcttggtgagaaaaaagactgggtttcttatgat
ctgccccctgcattgattggtcgcgctttaggtgggaaataccgaggtcaaacccaaaaa
tggtatgttttcggatttgacggtcatgatcatgatattcgtttagacttacacacaccc
cctgaatttagcgcgtgggaatgggttccccctcaggagcttttacaacgcaatcttggt
tttaaaagagagctctatgaaaagctccttccagaattagaacatatttatcaagcagcc
tctaaggattggatccgtaccaaacgcgcataa
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