Swingsia samuiensis: E3D00_01790
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Entry
E3D00_01790 CDS
T06080
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ssam
Swingsia samuiensis
Pathway
ssam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
E3D00_01790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssam02000
]
E3D00_01790
Enzymes [BR:
ssam01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
E3D00_01790
Transporters [BR:
ssam02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
E3D00_01790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
ABC_ATPase
AAA_30
AAA_29
AAA_21
RsgA_GTPase
SbcC_Walker_B
Pirin_C_2
AAA_33
Rad17
Motif
Other DBs
NCBI-ProteinID:
QDH17942
UniProt:
A0A4Y6UK56
LinkDB
All DBs
Position
complement(376939..378693)
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AA seq
584 aa
AA seq
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MKKKIALDIDSKVLVRRIWHEEMRKHVSQILLVIALTIVMAGLTALYPVVIKRAVDMFSA
QDPRILYQVPILVVIVTSLKAASQYGQTIAVQNLVLTVIRGLQSKMFQHALQTDVSCIER
EAPAQWAARFTTDAISIREAMIRVVNALGDVVTVVGLVAAMFWADWELSLIALVLYPVAA
VPIQKLGKKVRRASGGMQEQIGETSALLNESFALARQVRIYRMEDRENQRVDHSLSLLHA
AFLRIAKGRARVDPVLEVLGGTAVAAVLGFAGWRAAMGGATLGDFTAFITALLTAARPIR
ALGSLNTAMQEGLAGLARVFAVIDEPPAVLERDKATELPSGKGHLVFEDVAYRYEDGRVG
LANLTLDVQPGQTVALVGPSGAGKSTALSLIPRLHDVSNGRILLEGMDIRDARLSSLRDA
IAYVSQDTTLFDLSLIENVWIGRPAASREEVEEACRMAAVDFIDNLPNGLETRVGPGGRR
LSGGQRQRVALARALLRDPRVLLLDEATSALDSQSEATVQKALTTLRAGRTTIIVAHRLA
TVQTADIIAVMEEGRIVEIGPHAELIRKDGLYARLVRIQSLEAA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaaaatagcccttgatattgatagtaaggttttagtgcgacggatttggcac
gaggaaatgcgcaagcatgtgagccaaattcttctggttattgctcttacaatagtgatg
gcagggctaacagccttatacccagtcgtgattaaaagggctgttgatatgttctcagct
caagatccacgtatcttataccaagtgccaattctcgttgttatcgtcacgagcttaaag
gctgcgtcccaatatgggcaaacgattgccgttcagaatttggttttgacggttattcgt
ggtttgcaatcaaaaatgtttcagcatgcactgcaaacggatgtgtcttgcattgagcgc
gaggcacctgctcagtgggctgctcggtttacaacggatgccatttccatacgtgaagcc
atgattagggtcgtgaatgcgctgggcgatgtggtgacggttgtaggacttgttgctgct
atgttttgggccgattgggagctaagcctgattgctcttgtattgtatcctgttgccgcg
gtccctatccagaagttgggcaaaaaagttcggcgtgcgtcaggtggtatgcaagagcag
ataggagaaacatctgcgttattaaatgagagttttgctcttgcgcgccaagttcgtatt
tatcggatggaagaccgcgaaaaccaacgcgttgatcattctctcagccttttacatgct
gcctttttgcggattgcaaaggggagagcgcgtgtcgaccctgttcttgaagtgctgggg
gggacggctgtcgcggctgttttaggatttgctggatggcgtgcggcgatgggcggtgcg
acattgggggacttcaccgcttttatcacagcgctattaactgctgcacggcctatccgt
gctttaggatccttaaatacagcgatgcaagaaggtttggcaggcttagcacgtgtgttt
gctgtgattgatgagcccccggctgttcttgaacgtgataaagccacagaacttccttct
ggaaaaggccaccttgtttttgaggatgttgcatatcggtatgaagatggcagagtaggg
cttgcaaacttaactctggatgttcaaccgggacaaacggttgcattagtagggcctagc
ggtgcaggaaaatcaacagcattgtctcttattccacgcctacatgacgttagtaatgga
cgtatcttgttagaaggaatggatattcgagatgcgcgattatcttctttaagagatgcg
attgcttacgtcagtcaggatacgacgctttttgatctttctttgatagagaatgtttgg
attgggcggccggcagcaagccgagaggaagttgaagaggcatgccgcatggctgcggta
gactttattgataatctaccgaatggattagaaacgagagttggtccaggtggtcggcgt
ctatctggcgggcagagacaacgtgttgccctcgcacgagcattattgcgagatccgcgt
gtattgcttttagacgaagcaacaagtgctcttgattcacaaagtgaagcaactgtgcag
aaagctcttacaactttaagagcaggacgcacgactattatcgttgcccatcgcttagcg
acagttcaaacagcggatattatagctgttatggaagaggggcgtattgttgaaataggc
ccccatgcagaattgatacgtaaagatgggctttatgcgcgtttggtacggatccaatcc
ttagaggctgcttga
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