Swingsia samuiensis: E3D00_01795
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Entry
E3D00_01795 CDS
T06080
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ssam
Swingsia samuiensis
Pathway
ssam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3D00_01795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssam03019
]
E3D00_01795
Enzymes [BR:
ssam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
E3D00_01795
Messenger RNA biogenesis [BR:
ssam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E3D00_01795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QDH16441
UniProt:
A0A4Y6UJ77
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All DBs
Position
complement(378755..379951)
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AA seq
398 aa
AA seq
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MILQNTLLKNIEKSEGLARLWTVLPTARLVGGSVRDLLCGRKINDLDLATPEPPERVQEL
LEAAGITNIPTGISHGTITAIINREPYEITTLRRDEETDGRHAVVAWTSDWKEDAARRDF
TINAMSLDQNGVLYDYFHGQEDLEAGHVRFVGTAEKRIEEDALRALRFFRFYARYGEGAP
DREAYQAIQDHLNWMDGLSAERIASELLKILAGPRVMETLRPMDKCGLLPHLLKRPDLVS
LERLLNCDAPVDSILRLAALYPDNLDVGVQLKLSNADKKRLTMMRGEDPVLELNMSDHEM
RRLRFKFALQSILDKSWLTQAQRQGHPDQQWSVFREALSGLEQPVFPLSGKDAQDAGIPA
GRFIGMWLQKGQEWWMAQGCVPNKDECLTYLKNHPLQN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgattctacaaaatactcttttaaaaaatatcgaaaaatcagaagggttggctcgttta
tggacggtcttgcctacggctcgcctcgtgggagggtccgttcgggacttgttgtgcggc
cgaaaaattaatgatctcgatttagctacaccagaaccaccggagcgtgttcaggagctt
ttagaggctgctgggattacgaatattccaaccggtatttcccatgggacgattaccgca
atcattaatcgtgagccatatgaaataacgacattgcggcgtgatgaagaaaccgatggt
cgtcatgctgttgttgcatggacctcggactggaaagaggacgcggcgcgaagagatttt
accatcaatgccatgtctttagatcagaacggggttttatatgattattttcatggccag
gaagatctggaagcagggcatgttcgctttgtcggaacagcagaaaagcggattgaggaa
gacgctctgcgtgctttacggttttttcgcttttatgcgcgctatggagaaggagcaccc
gatcgggaggcgtatcaggccattcaggatcatttaaattggatggatggtctttcggca
gagcgtattgcgtctgaacttttaaaaatcctcgctgggccaagagttatggaaacatta
cggccaatggacaagtgcggtttattgccgcatcttttaaaaaggcctgatcttgtttcg
ttggagcgtttgcttaactgtgatgcccctgtagattctattttgcgactggcggcgctt
taccctgataatttagatgtgggcgtgcagttaaagttgtcgaatgctgataaaaaacgc
cttacgatgatgcgcggggaggaccctgtgttagagctgaatatgtctgatcatgagatg
agacgtttacgctttaaattcgctttacaatctatcttagataaaagttggttaacgcag
gcgcaacggcagggccatccagatcagcaatggtctgtttttcgtgaagctctgtctggt
ctggagcaacctgtttttccattaagtggaaaagatgcacaagatgctggtattcctgca
gggcgtttcatcggtatgtggttacaaaaagggcaggaatggtggatggcacaggggtgt
gttccgaataaagacgagtgtttaacgtatttaaaaaaccatcctctacaaaattaa
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